RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 LINC00612Q8N6U2 182 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 ZSCAN4Q8NAM6 433 aaPredicted RBP3.83□□□□□ -1.8
CHD8-207ENST00000554384 OR9A4Q8NGU2 314 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 TFB1MQ8WVM0 346 aaKnown RBP3.83□□□□□ -1.8
CHD8-207ENST00000554384 OR5M11Q96RB7 305 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 ELOVL4Q9GZR5 314 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 RAB33BQ9H082 229 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 PNO1Q9NRX1 252 aaKnown RBP3.83□□□□□ -1.8
CHD8-207ENST00000554384 PAK1IP1Q9NWT1 392 aaPredicted RBP3.83□□□□□ -1.8
CHD8-207ENST00000554384 COL5A3P25940 1745 aaPredicted RBP3.83□□□□□ -1.8
CHD8-207ENST00000554384 RBBP6Q7Z6E9 1792 aaKnown RBP3.83□□□□□ -1.8
CHD8-207ENST00000554384 CACNA1SQ13698 1873 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 ANKRD31Q8N7Z5 1873 aa3.83□□□□□ -1.8
CHD8-207ENST00000554384 A0A1W2PP64 1363 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 TONSLQ96HA7 1378 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 E9PLD3 99 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 XPO1O14980 1071 aaKnown RBP3.82□□□□□ -1.8
CHD8-207ENST00000554384 CTAGE5O15320 804 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 NOL3O60936 208 aaKnown RBP3.82□□□□□ -1.8
CHD8-207ENST00000554384 ZNF254O75437 659 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 CCL5P13501 91 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 UQCRC2P22695 453 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 SOX6P35712 828 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 XCR1P46094 333 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 ACADVLP49748 655 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 SLC39A6Q13433 755 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 ATXN7L3Q14CW9 347 aaPredicted RBP3.82□□□□□ -1.8
CHD8-207ENST00000554384 NADK2Q4G0N4 442 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 TEX44Q53QW1 395 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 SLC22A10Q63ZE4 541 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 ACSM5Q6NUN0 579 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 IFNEQ86WN2 208 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 ZDHHC21Q8IVQ6 265 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 ZNF540Q8NDQ6 660 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 MRAPQ8TCY5 172 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 TRUB1Q8WWH5 349 aaKnown RBP3.82□□□□□ -1.8
CHD8-207ENST00000554384 THRSPQ92748 146 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 ERP44Q9BS26 406 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 DEFB126Q9BYW3 111 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 TMEM117Q9H0C3 514 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 GSTK1Q9Y2Q3 226 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 KIF3AQ9Y496 699 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 MUC6Q6W4X9 2439 aa3.82□□□□□ -1.8
CHD8-207ENST00000554384 EDC4Q6P2E9 1401 aaKnown RBP3.81□□□□□ -1.8
CHD8-207ENST00000554384 RTL1A6NKG5 1358 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 CDHR2Q9BYE9 1310 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 FAM220BPB1ANY3 271 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 H3BMQ9 156 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 NUDT21O43809 227 aaKnown RBP3.81□□□□□ -1.8
CHD8-207ENST00000554384 OPN1LWP04000 364 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 PTMAP06454 111 aaKnown RBP3.81□□□□□ -1.8
CHD8-207ENST00000554384 HBQ1P09105 142 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 CPN1P15169 458 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 H2AFXP16104 143 aaPredicted RBP3.81□□□□□ -1.8
CHD8-207ENST00000554384 PTMSP20962 102 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 ATP5A1P25705 553 aaKnown RBP3.81□□□□□ -1.8
CHD8-207ENST00000554384 HTR2AP28223 471 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 TNNT2P45379 298 aaPredicted RBP3.81□□□□□ -1.8
CHD8-207ENST00000554384 VLDLRP98155 873 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 TIGITQ495A1 244 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 GLYR1Q49A26 553 aaPredicted RBP3.81□□□□□ -1.8
CHD8-207ENST00000554384 GGTA1PQ4G0N0 100 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 RABGAP1LQ5R372 815 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 OR8G2PQ6IF36 304 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 ZNF530Q6P9A1 599 aaPredicted RBP3.81□□□□□ -1.8
CHD8-207ENST00000554384 LRRC70Q7Z2Q7 622 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 ANKRD37Q7Z713 158 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 LRRC43Q8N309 656 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 IPMKQ8NFU5 416 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 PNPT1Q8TCS8 783 aaKnown RBP3.81□□□□□ -1.8
CHD8-207ENST00000554384 ZPLD1Q8TCW7 415 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 PSMG2Q969U7 264 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 TMEM80Q96HE8 168 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 TTC25Q96NG3 672 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 SIGLEC12Q96PQ1 595 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 COG4Q9H9E3 785 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 MRPL39Q9NYK5 338 aaKnown RBP3.81□□□□□ -1.8
CHD8-207ENST00000554384 EHFQ9NZC4 300 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 EPS15L1Q9UBC2 864 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 GALPQ9UBC7 116 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 CYTH4Q9UIA0 394 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 CRLS1Q9UJA2 301 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 VSIG4Q9Y279 399 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 PPIAL4AQ9Y536 164 aa3.81□□□□□ -1.8
CHD8-207ENST00000554384 NDC80O14777 642 aa3.8□□□□□ -1.8
CHD8-207ENST00000554384 ZSCAN12O43309 604 aa3.8□□□□□ -1.8
CHD8-207ENST00000554384 TRIM3O75382 744 aaPredicted RBP3.8□□□□□ -1.8
CHD8-207ENST00000554384 CA1P00915 261 aaPredicted RBP3.8□□□□□ -1.8
CHD8-207ENST00000554384 HNRNPA2B1P22626 353 aaKnown RBP3.8□□□□□ -1.8
CHD8-207ENST00000554384 STARP49675 285 aa3.8□□□□□ -1.8
CHD8-207ENST00000554384 PLA2G16P53816 162 aa3.8□□□□□ -1.8
CHD8-207ENST00000554384 CD47Q08722 323 aa3.8□□□□□ -1.8
CHD8-207ENST00000554384 PVRIGQ6DKI7 326 aa3.8□□□□□ -1.8
CHD8-207ENST00000554384 PYHIN1Q6K0P9 492 aa3.8□□□□□ -1.8
CHD8-207ENST00000554384 C2orf66Q6UXQ4 117 aa3.8□□□□□ -1.8
CHD8-207ENST00000554384 TMEM17Q86X19 198 aa3.8□□□□□ -1.8
CHD8-207ENST00000554384 ZNF677Q86XU0 584 aa3.8□□□□□ -1.8
CHD8-207ENST00000554384 SLC38A6Q8IZM9 456 aa3.8□□□□□ -1.8
CHD8-207ENST00000554384 LYG1Q8N1E2 194 aa3.8□□□□□ -1.8
CHD8-207ENST00000554384 DENND6BQ8NEG7 585 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms