RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 EME1Q96AY2 570 aa13.17□□□□□ -0.3
SHMT2-210ENST00000553950 ALPK1Q96QP1 1244 aa13.17□□□□□ -0.3
SHMT2-210ENST00000553950 WFDC6Q9BQY6 131 aa13.17□□□□□ -0.3
SHMT2-210ENST00000553950 TMEM43Q9BTV4 400 aa13.17□□□□□ -0.3
SHMT2-210ENST00000553950 KLHL4Q9C0H6 718 aa13.17□□□□□ -0.3
SHMT2-210ENST00000553950 ADAM19Q9H013 955 aa13.17□□□□□ -0.3
SHMT2-210ENST00000553950 UBQLN3Q9H347 655 aa13.17□□□□□ -0.3
SHMT2-210ENST00000553950 CTPS2Q9NRF8 586 aa13.17□□□□□ -0.3
SHMT2-210ENST00000553950 KIF17Q9P2E2 1029 aa13.17□□□□□ -0.3
SHMT2-210ENST00000553950 ENOPH1Q9UHY7 261 aa13.17□□□□□ -0.3
SHMT2-210ENST00000553950 NCKAP5O14513 1909 aa13.17□□□□□ -0.3
SHMT2-210ENST00000553950 CHD8Q9HCK8 2581 aa13.17□□□□□ -0.3
SHMT2-210ENST00000553950 CACNA1GO43497 2377 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 CELSR3Q9NYQ7 3312 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 A0A087WUJ7 227 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 GJE1A6NN92 205 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 G3V2T6 193 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 GMFGO60234 142 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 SEMA7AO75326 666 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 GLSO94925 669 aaPredicted RBP13.16□□□□□ -0.3
SHMT2-210ENST00000553950 RASAL1O95294 804 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 ZNF24P17028 368 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 TACR3P29371 465 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 LIMS1P48059 325 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 FOXF1Q12946 379 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 SNCBQ16143 134 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 RAET1LQ5VY80 246 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 HMBOX1Q6NT76 420 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 TTC33Q6PID6 262 aaPredicted RBP13.16□□□□□ -0.3
SHMT2-210ENST00000553950 ZNF730Q6ZMV8 503 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 AMIGO2Q86SJ2 522 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 LILRA2Q8N149 483 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 PACRGLQ8N7B6 248 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 ICA1LQ8NDH6 482 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 OR4C15Q8NGM1 316 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 OR14L1PQ8NHC6 308 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 PIGXQ8TBF5 258 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 PNPLA2Q96AD5 504 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 GNRHR2Q96P88 292 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 ZNF426Q9BUY5 554 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 HES7Q9BYE0 225 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 GABARAPL1Q9H0R8 117 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 ZNF556Q9HAH1 456 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 MAN2C1Q9NTJ4 1040 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 CHRNA9Q9UGM1 479 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 MED31Q9Y3C7 131 aa13.16□□□□□ -0.3
SHMT2-210ENST00000553950 FREM3P0C091 2139 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 SH3PXD2BA1X283 911 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 ERVH48-1M5A8F1 160 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 TFECO14948 347 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-210ENST00000553950 ZNF208O43345 1280 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 NTN1O95631 604 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 HPRP00739 348 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 CRYABP02511 175 aaKnown RBP13.15□□□□□ -0.3
SHMT2-210ENST00000553950 HPNP05981 417 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 ANXA8P13928 327 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 CLK1P49759 484 aaKnown RBP13.15□□□□□ -0.3
SHMT2-210ENST00000553950 UGT2B15P54855 530 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 TAF11Q15544 211 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 MICAQ29983 383 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 EXOC3L2Q2M3D2 409 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 MBOAT2Q6ZWT7 520 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 CDK20Q8IZL9 346 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 OR10G2Q8NGC3 310 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 SLC7A13Q8TCU3 470 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 STK35Q8TDR2 534 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 GIPC3Q8TF64 312 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 TMEM239Q8WW34 195 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 DDIT4LQ96D03 193 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 RBM4BQ9BQ04 359 aaKnown RBP13.15□□□□□ -0.3
SHMT2-210ENST00000553950 RBM4Q9BWF3 364 aaKnown RBP13.15□□□□□ -0.3
SHMT2-210ENST00000553950 NDEL1Q9GZM8 345 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 SEMA6AQ9H2E6 1030 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 RHCGQ9UBD6 479 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 OSGIN1Q9UJX0 560 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 OAZ3Q9UMX2 235 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 ORC6Q9Y5N6 252 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 U3KQV3 271 aa13.15□□□□□ -0.3
SHMT2-210ENST00000553950 KIAA1549Q9HCM3 1950 aa13.14□□□□□ -0.31
SHMT2-210ENST00000553950 TMED7-TICAM2A0A0A6YYA0 188 aa13.14□□□□□ -0.31
SHMT2-210ENST00000553950 C17orf51A8MQB3 221 aa13.14□□□□□ -0.31
SHMT2-210ENST00000553950 A8MVM7 634 aa13.14□□□□□ -0.31
SHMT2-210ENST00000553950 SUSD5O60279 629 aa13.14□□□□□ -0.31
SHMT2-210ENST00000553950 OR10H3O60404 316 aa13.14□□□□□ -0.31
SHMT2-210ENST00000553950 ADAP00813 363 aa13.14□□□□□ -0.31
SHMT2-210ENST00000553950 FAM87AP0C7U9 286 aa13.14□□□□□ -0.31
SHMT2-210ENST00000553950 CDH2P19022 906 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-210ENST00000553950 MST1P26927 711 aa13.14□□□□□ -0.31
SHMT2-210ENST00000553950 PPIAP62937 165 aaKnown RBP13.14□□□□□ -0.31
SHMT2-210ENST00000553950 MFSD13AQ14CX5 517 aa13.14□□□□□ -0.31
SHMT2-210ENST00000553950 INPP5JQ15735 1006 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-210ENST00000553950 TOMM34Q15785 309 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-210ENST00000553950 RFX4Q33E94 735 aa13.14□□□□□ -0.31
SHMT2-210ENST00000553950 PODNL1Q6PEZ8 512 aa13.14□□□□□ -0.31
SHMT2-210ENST00000553950 ARSKQ6UWY0 536 aa13.14□□□□□ -0.31
SHMT2-210ENST00000553950 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-210ENST00000553950 TSPYL5Q86VY4 417 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-210ENST00000553950 RBMXL3Q8N7X1 1067 aaKnown RBP13.14□□□□□ -0.31
SHMT2-210ENST00000553950 FAM83FQ8NEG4 500 aaPredicted RBP13.14□□□□□ -0.31
SHMT2-210ENST00000553950 OR4K5Q8NGD3 323 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms