RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 RLIMQ9NVW2 624 aa16.56■□□□□ 0.24
CPSF2-202ENST00000553427 JKAMPQ9P055 326 aa16.56■□□□□ 0.24
CPSF2-202ENST00000553427 ARMCX1Q9P291 453 aa16.56■□□□□ 0.24
CPSF2-202ENST00000553427 MCTS1Q9ULC4 181 aaKnown RBP16.56■□□□□ 0.24
CPSF2-202ENST00000553427 ANGPT4Q9Y264 503 aa16.56■□□□□ 0.24
CPSF2-202ENST00000553427 SPIN1Q9Y657 262 aaPredicted RBP16.56■□□□□ 0.24
CPSF2-202ENST00000553427 A0A1W2PNV4 684 aa16.55■□□□□ 0.24
CPSF2-202ENST00000553427 AP3D1O14617 1153 aa16.55■□□□□ 0.24
CPSF2-202ENST00000553427 TNFSF13O75888 250 aa16.55■□□□□ 0.24
CPSF2-202ENST00000553427 RYKP34925 604 aa16.55■□□□□ 0.24
CPSF2-202ENST00000553427 SFTPDP35247 375 aa16.55■□□□□ 0.24
CPSF2-202ENST00000553427 SLC1A3P43003 542 aa16.55■□□□□ 0.24
CPSF2-202ENST00000553427 MAP2K6P52564 334 aa16.55■□□□□ 0.24
CPSF2-202ENST00000553427 PCBP3P57721 371 aaKnown RBP16.55■□□□□ 0.24
CPSF2-202ENST00000553427 CARD18P57730 90 aa16.55■□□□□ 0.24
CPSF2-202ENST00000553427 GNGT1P63211 74 aa16.55■□□□□ 0.24
CPSF2-202ENST00000553427 FOXF2Q12947 444 aa16.55■□□□□ 0.24
CPSF2-202ENST00000553427 CAPRIN1Q14444 709 aaKnown RBP16.55■□□□□ 0.24
CPSF2-202ENST00000553427 CYP51A1Q16850 503 aa16.55■□□□□ 0.24
CPSF2-202ENST00000553427 ZNF311Q5JNZ3 666 aa16.55■□□□□ 0.24
CPSF2-202ENST00000553427 DHRS4L2Q6PKH6 230 aa16.55■□□□□ 0.24
CPSF2-202ENST00000553427 PLXDC2Q6UX71 529 aa16.55■□□□□ 0.24
CPSF2-202ENST00000553427 CLIP4Q8N3C7 705 aa16.55■□□□□ 0.24
CPSF2-202ENST00000553427 CPNE4Q96A23 557 aaPredicted RBP16.55■□□□□ 0.24
CPSF2-202ENST00000553427 INTS12Q96CB8 462 aaKnown RBP16.55■□□□□ 0.24
CPSF2-202ENST00000553427 GID8Q9NWU2 228 aa16.55■□□□□ 0.24
CPSF2-202ENST00000553427 CHRNA9Q9UGM1 479 aa16.55■□□□□ 0.24
CPSF2-202ENST00000553427 FOXD3Q9UJU5 478 aaPredicted RBP16.55■□□□□ 0.24
CPSF2-202ENST00000553427 INTS1Q8N201 2190 aaKnown RBP16.55■□□□□ 0.24
CPSF2-202ENST00000553427 ANKHD1Q8IWZ3 2542 aaKnown RBP16.54■□□□□ 0.24
CPSF2-202ENST00000553427 PRORSD1PA6NEY8 169 aa16.54■□□□□ 0.24
CPSF2-202ENST00000553427 SYT5O00445 386 aa16.54■□□□□ 0.24
CPSF2-202ENST00000553427 CXCL13O43927 109 aa16.54■□□□□ 0.24
CPSF2-202ENST00000553427 SYNGR4O95473 234 aa16.54■□□□□ 0.24
CPSF2-202ENST00000553427 COX6B1P14854 86 aa16.54■□□□□ 0.24
CPSF2-202ENST00000553427 SLC7A1P30825 629 aa16.54■□□□□ 0.24
CPSF2-202ENST00000553427 ACAA2P42765 397 aaKnown RBP16.54■□□□□ 0.24
CPSF2-202ENST00000553427 IDH2P48735 452 aaKnown RBP16.54■□□□□ 0.24
CPSF2-202ENST00000553427 CLK1P49759 484 aaKnown RBP16.54■□□□□ 0.24
CPSF2-202ENST00000553427 GZMMP51124 257 aa16.54■□□□□ 0.24
CPSF2-202ENST00000553427 GYS2P54840 703 aa16.54■□□□□ 0.24
CPSF2-202ENST00000553427 ZNF239Q16600 458 aaKnown RBP16.54■□□□□ 0.24
CPSF2-202ENST00000553427 TMEM176BQ3YBM2 270 aaPredicted RBP16.54■□□□□ 0.24
CPSF2-202ENST00000553427 ZNF787Q6DD87 383 aa16.54■□□□□ 0.24
CPSF2-202ENST00000553427 NANOGP8Q6NSW7 305 aa16.54■□□□□ 0.24
CPSF2-202ENST00000553427 CPLX4Q7Z7G2 160 aa16.54■□□□□ 0.24
CPSF2-202ENST00000553427 MTDHQ86UE4 582 aaKnown RBP16.54■□□□□ 0.24
CPSF2-202ENST00000553427 GCNT2Q8N0V5 402 aa16.54■□□□□ 0.24
CPSF2-202ENST00000553427 BHLHE22Q8NFJ8 381 aaPredicted RBP16.54■□□□□ 0.24
CPSF2-202ENST00000553427 OSTF1Q92882 214 aa16.54■□□□□ 0.24
CPSF2-202ENST00000553427 LRRC46Q96FV0 321 aa16.54■□□□□ 0.24
CPSF2-202ENST00000553427 ZNF607Q96SK3 696 aa16.54■□□□□ 0.24
CPSF2-202ENST00000553427 TRIM8Q9BZR9 551 aa16.54■□□□□ 0.24
CPSF2-202ENST00000553427 MYLK2Q9H1R3 596 aa16.54■□□□□ 0.24
CPSF2-202ENST00000553427 EVA1AQ9H8M9 152 aa16.54■□□□□ 0.24
CPSF2-202ENST00000553427 NANOGQ9H9S0 305 aa16.54■□□□□ 0.24
CPSF2-202ENST00000553427 GLRX2Q9NS18 164 aa16.54■□□□□ 0.24
CPSF2-202ENST00000553427 MED12LQ86YW9 2145 aa16.54■□□□□ 0.24
CPSF2-202ENST00000553427 PKDREJQ9NTG1 2253 aa16.53■□□□□ 0.24
CPSF2-202ENST00000553427 LOC100653049A0A140TA62 436 aa16.53■□□□□ 0.24
CPSF2-202ENST00000553427 SERPINB7O75635 380 aa16.53■□□□□ 0.24
CPSF2-202ENST00000553427 KRT34O76011 436 aa16.53■□□□□ 0.24
CPSF2-202ENST00000553427 AQP8O94778 261 aa16.53■□□□□ 0.24
CPSF2-202ENST00000553427 OPN1LWP04000 364 aa16.53■□□□□ 0.24
CPSF2-202ENST00000553427 PCGF2P35227 344 aa16.53■□□□□ 0.24
CPSF2-202ENST00000553427 PEX19P40855 299 aa16.53■□□□□ 0.24
CPSF2-202ENST00000553427 PCYT1AP49585 367 aa16.53■□□□□ 0.24
CPSF2-202ENST00000553427 POLR2HP52434 150 aaKnown RBP16.53■□□□□ 0.24
CPSF2-202ENST00000553427 RAC3P60763 192 aa16.53■□□□□ 0.24
CPSF2-202ENST00000553427 SYT14P1Q58G82 188 aa16.53■□□□□ 0.24
CPSF2-202ENST00000553427 CALHM3Q86XJ0 350 aa16.53■□□□□ 0.24
CPSF2-202ENST00000553427 ZZZ3Q8IYH5 903 aa16.53■□□□□ 0.24
CPSF2-202ENST00000553427 RNF128Q8TEB7 428 aa16.53■□□□□ 0.24
CPSF2-202ENST00000553427 RNASE6Q93091 150 aaKnown RBP16.53■□□□□ 0.24
CPSF2-202ENST00000553427 GMPPAQ96IJ6 420 aaPredicted RBP16.53■□□□□ 0.24
CPSF2-202ENST00000553427 SLC39A3Q9BRY0 314 aa16.53■□□□□ 0.24
CPSF2-202ENST00000553427 ADAM19Q9H013 955 aa16.53■□□□□ 0.24
CPSF2-202ENST00000553427 FAM107BQ9H098 131 aa16.53■□□□□ 0.24
CPSF2-202ENST00000553427 SLC24A3Q9HC58 644 aa16.53■□□□□ 0.24
CPSF2-202ENST00000553427 GP6Q9HCN6 339 aa16.53■□□□□ 0.24
CPSF2-202ENST00000553427 CTPS2Q9NRF8 586 aa16.53■□□□□ 0.24
CPSF2-202ENST00000553427 PACSIN3Q9UKS6 424 aa16.53■□□□□ 0.24
CPSF2-202ENST00000553427 MAST4O15021 2626 aa16.52■□□□□ 0.24
CPSF2-202ENST00000553427 HCFC1P51610 2035 aa16.52■□□□□ 0.24
CPSF2-202ENST00000553427 ITPR2Q14571 2701 aa16.52■□□□□ 0.24
CPSF2-202ENST00000553427 ZNF208O43345 1280 aa16.52■□□□□ 0.24
CPSF2-202ENST00000553427 DNPH1O43598 174 aa16.52■□□□□ 0.24
CPSF2-202ENST00000553427 SS18L1O75177 396 aaPredicted RBP16.52■□□□□ 0.24
CPSF2-202ENST00000553427 COX4I1P13073 169 aa16.52■□□□□ 0.24
CPSF2-202ENST00000553427 KIR2DL2P43627 348 aaPredicted RBP16.52■□□□□ 0.24
CPSF2-202ENST00000553427 WBP2NLQ6ICG8 309 aa16.52■□□□□ 0.24
CPSF2-202ENST00000553427 ADGRG3Q86Y34 549 aa16.52■□□□□ 0.24
CPSF2-202ENST00000553427 DMRTC2Q8IXT2 367 aaPredicted RBP16.52■□□□□ 0.24
CPSF2-202ENST00000553427 OR10A6Q8NH74 314 aa16.52■□□□□ 0.24
CPSF2-202ENST00000553427 MARVELD3Q96A59 401 aa16.52■□□□□ 0.24
CPSF2-202ENST00000553427 RCN3Q96D15 328 aa16.52■□□□□ 0.24
CPSF2-202ENST00000553427 RSPO3Q9BXY4 272 aaPredicted RBP16.52■□□□□ 0.24
CPSF2-202ENST00000553427 SRXN1Q9BYN0 137 aa16.52■□□□□ 0.24
CPSF2-202ENST00000553427 PRRG4Q9BZD6 226 aa16.52■□□□□ 0.24
CPSF2-202ENST00000553427 OSGIN1Q9UJX0 560 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms