RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 ZNF682O95780 498 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 GP1BBP13224 206 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 TACR3P29371 465 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 PTGS2P35354 604 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 APOBEC1P41238 236 aaKnown RBP13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 UQCRFS1P47985 274 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 TPD52P55327 224 aaPredicted RBP13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 RAC1P63000 192 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 C19orf57Q0VDD7 668 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 MERTKQ12866 999 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 OR1Q1Q15612 314 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 C3AR1Q16581 482 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 RTL6Q6ICC9 239 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 AAGABQ6PD74 315 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 LINC00114Q6XXX2 140 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 DHFR2Q86XF0 187 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 VANGL1Q8TAA9 524 aaPredicted RBP13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 FAM57AQ8TBR7 257 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 GEMIN6Q8WXD5 167 aaKnown RBP13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 TMEM234Q8WY98 164 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 PROX1Q92786 737 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 TPD52L3Q96J77 140 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 MCHR1Q99705 422 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 ZNF559Q9BR84 538 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 MMADHCQ9H3L0 296 aaPredicted RBP13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 LDAHQ9H6V9 325 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 COQ10BQ9H8M1 238 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 PNPLA3Q9NST1 481 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 RPS6KA6Q9UK32 745 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 ACAD8Q9UKU7 415 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 A4GNTQ9UNA3 340 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 SAMD4AQ9UPU9 718 aaKnown RBP13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 SLC9A8Q9Y2E8 581 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 AP4B1Q9Y6B7 739 aa13.37□□□□□ -0.27
MTHFD1-204ENST00000553405 KIAA1549Q9HCM3 1950 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 ESPL1Q14674 2120 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 IGKV1D-42A0A075B6H8 117 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 TMED7-TICAM2A0A0A6YYA0 188 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 EIF4E1BA6NMX2 242 aaKnown RBP13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 KDM4EB2RXH2 506 aaPredicted RBP13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 ADAMDEC1O15204 470 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 SLC19A2O60779 497 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 NPIPB7O75200 414 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 STSP08842 583 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 HTR3AP46098 478 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 POLR2HP52434 150 aaKnown RBP13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 VLDLRP98155 873 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 KCNC4Q03721 635 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 EGR4Q05215 589 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 SELENBP1Q13228 472 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 IFI44LQ53G44 452 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 MTX3Q5HYI7 312 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 ENTPD8Q5MY95 495 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 ZNF613Q6PF04 617 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 WDR88Q6ZMY6 472 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 DOLPP1Q86YN1 238 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 CADM2Q8N3J6 435 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 ZNF563Q8TA94 476 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 LZICQ8WZA0 190 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 SLC38A4Q969I6 547 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 SARAFQ96BY9 339 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 PYURFQ96I23 114 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 PRSS27Q9BQR3 290 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 ZNF426Q9BUY5 554 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 TMEM185BQ9H7F4 350 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 C12orf10Q9HB07 376 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 MAN2C1Q9NTJ4 1040 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 NDUFAF4Q9P032 175 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 SLC13A4Q9UKG4 626 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 TMED7Q9Y3B3 224 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 FAM215AQ9Y5M1 114 aa13.36□□□□□ -0.27
MTHFD1-204ENST00000553405 MPDZO75970 2070 aa13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 GCN1Q92616 2671 aaKnown RBP13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 A0A0J9YW62 118 aa13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 TCRBV3S1A0A5B6 114 aa13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 TMEM72A0PK05 275 aa13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 ZC3H12DA2A288 527 aaKnown RBP13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 FAM47E-STBD1D6RA91 191 aa13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 H3BML4 177 aa13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 BCKDKO14874 412 aa13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 FZD7O75084 574 aa13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 PEPDP12955 493 aa13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 UQCRBP14927 111 aa13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 POU3F2P20265 443 aaPredicted RBP13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 GNLYP22749 145 aa13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 MAGEA2P43356 314 aa13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 CDH12P55289 794 aa13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 GXYLT1Q4G148 440 aa13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 SWT1Q5T5J6 900 aaKnown RBP13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 RANBP3LQ86VV4 465 aaPredicted RBP13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 LILRA2Q8N149 483 aa13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 OR5M9Q8NGP3 310 aa13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 ADAMTS16Q8TE57 1224 aa13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 POLR2J2Q9GZM3 115 aaKnown RBP13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 POLR2J3Q9H1A7 115 aaKnown RBP13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 CHRNA9Q9UGM1 479 aa13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 ENPP4Q9Y6X5 453 aa13.35□□□□□ -0.27
MTHFD1-204ENST00000553405 A0A087WUJ7 227 aa13.34□□□□□ -0.27
MTHFD1-204ENST00000553405 AQP12BA6NM10 295 aa13.34□□□□□ -0.27
MTHFD1-204ENST00000553405 CPSF4LA6NMK7 179 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms