RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 ETV5P41161 510 aa4.71□□□□□ -1.66
SCFD1-208ENST00000553278 ELK3P41970 407 aa4.71□□□□□ -1.66
SCFD1-208ENST00000553278 HLCSP50747 726 aa4.71□□□□□ -1.66
SCFD1-208ENST00000553278 DAP3P51398 398 aaKnown RBP4.71□□□□□ -1.66
SCFD1-208ENST00000553278 CLDN8P56748 225 aa4.71□□□□□ -1.66
SCFD1-208ENST00000553278 CARD18P57730 90 aa4.71□□□□□ -1.66
SCFD1-208ENST00000553278 CALCOCO2Q13137 446 aa4.71□□□□□ -1.66
SCFD1-208ENST00000553278 SIX1Q15475 284 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-208ENST00000553278 GLYR1Q49A26 553 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-208ENST00000553278 VPS26BQ4G0F5 336 aa4.71□□□□□ -1.66
SCFD1-208ENST00000553278 ZNF57Q68EA5 555 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-208ENST00000553278 KIAA1161Q6NSJ0 714 aa4.71□□□□□ -1.66
SCFD1-208ENST00000553278 TMEM53Q6P2H8 277 aa4.71□□□□□ -1.66
SCFD1-208ENST00000553278 LRRC74BQ6ZQY2 392 aa4.71□□□□□ -1.66
SCFD1-208ENST00000553278 SLC47A2Q86VL8 602 aa4.71□□□□□ -1.66
SCFD1-208ENST00000553278 MICU2Q8IYU8 434 aa4.71□□□□□ -1.66
SCFD1-208ENST00000553278 FLVCR1-AS1Q8TAF5 88 aa4.71□□□□□ -1.66
SCFD1-208ENST00000553278 HCAR2Q8TDS4 363 aa4.71□□□□□ -1.66
SCFD1-208ENST00000553278 TOMM40LQ969M1 308 aa4.71□□□□□ -1.66
SCFD1-208ENST00000553278 PLEKHA8Q96JA3 519 aa4.71□□□□□ -1.66
SCFD1-208ENST00000553278 ZNF641Q96N77 438 aaPredicted RBP4.71□□□□□ -1.66
SCFD1-208ENST00000553278 CNN2Q99439 309 aaKnown RBP4.71□□□□□ -1.66
SCFD1-208ENST00000553278 ZNF670Q9BS34 389 aa4.71□□□□□ -1.66
SCFD1-208ENST00000553278 HCAR1Q9BXC0 346 aa4.71□□□□□ -1.66
SCFD1-208ENST00000553278 PPA2Q9H2U2 334 aa4.71□□□□□ -1.66
SCFD1-208ENST00000553278 NIPAL2Q9H841 368 aa4.71□□□□□ -1.66
SCFD1-208ENST00000553278 TMEM181Q9P2C4 612 aa4.71□□□□□ -1.66
SCFD1-208ENST00000553278 PEF1Q9UBV8 284 aaKnown RBP4.71□□□□□ -1.66
SCFD1-208ENST00000553278 SLC2A6Q9UGQ3 507 aa4.71□□□□□ -1.66
SCFD1-208ENST00000553278 TMCO1Q9UM00 188 aa4.71□□□□□ -1.66
SCFD1-208ENST00000553278 SAMD4AQ9UPU9 718 aaKnown RBP4.71□□□□□ -1.66
SCFD1-208ENST00000553278 PDE10AQ9Y233 779 aa4.71□□□□□ -1.66
SCFD1-208ENST00000553278 MRPL11Q9Y3B7 192 aaKnown RBP4.71□□□□□ -1.66
SCFD1-208ENST00000553278 IGKV2D-30A0A075B6S6 120 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 TRAV25A0A0B4J276 109 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 B4DXG7 233 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 PRKYO43930 277 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 DUS4LO95620 317 aaKnown RBP4.7□□□□□ -1.66
SCFD1-208ENST00000553278 IGLV1-44P01699 117 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 P04436 131 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 CD55P08174 381 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 ZNF26P17031 533 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-208ENST00000553278 COX5AP20674 150 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 CD1BP29016 333 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 NAMPTP43490 491 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 SLC11A1P49279 550 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 PRKXP51817 358 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 EFNA3P52797 238 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 SLC8A3P57103 927 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 KCNJ2P63252 427 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 VGLL4Q14135 290 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 KCNJ11Q14654 390 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 TGFBIQ15582 683 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 ZFP69Q49AA0 526 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 VWA2Q5GFL6 755 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 PLCXD3Q63HM9 321 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 FAM199XQ6PEV8 388 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-208ENST00000553278 C19orf35Q6ZS72 473 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 SCD5Q86SK9 330 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 OR2L13Q8N349 312 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 FAM110BQ8TC76 370 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.7□□□□□ -1.66
SCFD1-208ENST00000553278 SGK3Q96BR1 496 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 CELF6Q96J87 481 aaKnown RBP4.7□□□□□ -1.66
SCFD1-208ENST00000553278 PANX2Q96RD6 677 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 UPF3AQ9H1J1 476 aaKnown RBP4.7□□□□□ -1.66
SCFD1-208ENST00000553278 EHD1Q9H4M9 534 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 XKR8Q9H6D3 395 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 PNO1Q9NRX1 252 aaKnown RBP4.7□□□□□ -1.66
SCFD1-208ENST00000553278 C20orf96Q9NUD7 363 aaPredicted RBP4.7□□□□□ -1.66
SCFD1-208ENST00000553278 CACNG5Q9UF02 275 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 NUP50Q9UKX7 468 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 TBC1D24Q9ULP9 559 aa4.7□□□□□ -1.66
SCFD1-208ENST00000553278 A0A1W2PPV9 198 aa4.69□□□□□ -1.66
SCFD1-208ENST00000553278 IDSB3KWA1 339 aa4.69□□□□□ -1.66
SCFD1-208ENST00000553278 CLOCKO15516 846 aa4.69□□□□□ -1.66
SCFD1-208ENST00000553278 PSTPIP1O43586 416 aa4.69□□□□□ -1.66
SCFD1-208ENST00000553278 ZFAND5O76080 213 aa4.69□□□□□ -1.66
SCFD1-208ENST00000553278 OR2F2O95006 317 aa4.69□□□□□ -1.66
SCFD1-208ENST00000553278 LGI1O95970 557 aa4.69□□□□□ -1.66
SCFD1-208ENST00000553278 MMP1P03956 469 aa4.69□□□□□ -1.66
SCFD1-208ENST00000553278 LGALS2P05162 132 aa4.69□□□□□ -1.66
SCFD1-208ENST00000553278 ERCC1P07992 297 aaPredicted RBP4.69□□□□□ -1.66
SCFD1-208ENST00000553278 UMPSP11172 480 aa4.69□□□□□ -1.66
SCFD1-208ENST00000553278 EIF2S2P20042 333 aaKnown RBP4.69□□□□□ -1.66
SCFD1-208ENST00000553278 LMO2P25791 158 aa4.69□□□□□ -1.66
SCFD1-208ENST00000553278 ANXA13P27216 316 aa4.69□□□□□ -1.66
SCFD1-208ENST00000553278 RRM2P31350 389 aa4.69□□□□□ -1.66
SCFD1-208ENST00000553278 IFNA8P32881 189 aa4.69□□□□□ -1.66
SCFD1-208ENST00000553278 ATP5C1P36542 298 aaKnown RBP4.69□□□□□ -1.66
SCFD1-208ENST00000553278 NUP62P37198 522 aaPredicted RBP4.69□□□□□ -1.66
SCFD1-208ENST00000553278 CSNK1EP49674 416 aaKnown RBP4.69□□□□□ -1.66
SCFD1-208ENST00000553278 ATP4BP51164 291 aa4.69□□□□□ -1.66
SCFD1-208ENST00000553278 ARHGDIBP52566 201 aa4.69□□□□□ -1.66
SCFD1-208ENST00000553278 ACY1Q03154 408 aa4.69□□□□□ -1.66
SCFD1-208ENST00000553278 ASPHQ12797 758 aa4.69□□□□□ -1.66
SCFD1-208ENST00000553278 DPYSL3Q14195 570 aa4.69□□□□□ -1.66
SCFD1-208ENST00000553278 ZNF77Q15935 545 aa4.69□□□□□ -1.66
SCFD1-208ENST00000553278 MICAQ29983 383 aa4.69□□□□□ -1.66
SCFD1-208ENST00000553278 EMBQ6PCB8 327 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms