RNA–Protein interactions for RNA: ENST00000552590.6

PRIM1-208, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-208ENST00000552590 MED17Q9NVC6 651 aa7.01□□□□□ -1.29
PRIM1-208ENST00000552590 MALT1Q9UDY8 824 aa7.01□□□□□ -1.29
PRIM1-208ENST00000552590 LEF1Q9UJU2 399 aaPredicted RBP7.01□□□□□ -1.29
PRIM1-208ENST00000552590 PURGQ9UJV8 347 aaKnown RBP7.01□□□□□ -1.29
PRIM1-208ENST00000552590 OR10H1Q9Y4A9 318 aa7.01□□□□□ -1.29
PRIM1-208ENST00000552590 C7orf72A4D263 438 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 H3BS24 57 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 SYNGR3O43761 229 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 CYTIPO60759 359 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 ANGPTL1O95841 491 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 CTAGE8P0CG41 777 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 IGLL1P15814 213 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 PTPN7P35236 360 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 RAD52P43351 418 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 SEC24CP53992 1094 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 KRTAP10-11P60412 298 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 SARNPP82979 210 aaKnown RBP7□□□□□ -1.29
PRIM1-208ENST00000552590 EGR3Q06889 387 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 DDX39BQ13838 428 aaKnown RBP7□□□□□ -1.29
PRIM1-208ENST00000552590 HIST2H2ACQ16777 129 aaPredicted RBP7□□□□□ -1.29
PRIM1-208ENST00000552590 HIKESHIQ53FT3 197 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 RBM20Q5T481 1227 aaKnown RBP7□□□□□ -1.29
PRIM1-208ENST00000552590 HIST2H2AA3Q6FI13 130 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 FAM180BQ6P0A1 224 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 PGBD2Q6P3X8 592 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 ANKRD16Q6P6B7 361 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 KLHL24Q6TFL4 600 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 CTAGE4Q8IX94 777 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 PARP8Q8N3A8 854 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 C17orf78Q8N4C9 275 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 NUP37Q8NFH4 326 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 OR4F15Q8NGB8 312 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 SLC35B2Q8TB61 432 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 WDR34Q96EX3 536 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 VSTM2LQ96N03 204 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 EFCAB11Q9BUY7 163 aa7□□□□□ -1.29
PRIM1-208ENST00000552590 PPIAL4EA0A075B759 164 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 PPIAL4CA0A0B4J2A2 164 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 SDR42E2A6NKP2 422 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 PPIAL4DF5H284 164 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 TRAPPC2LH3BP13 241 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 M0R233 179 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 PDLIM1O00151 329 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 GPR137BO60478 399 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 ERAL1O75616 437 aaKnown RBP6.99□□□□□ -1.29
PRIM1-208ENST00000552590 ATP1B1P05026 303 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 GSNP06396 782 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 CECR9P0C854 216 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 PPIAL4FP0DN26 164 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 MSX2P35548 267 aaPredicted RBP6.99□□□□□ -1.29
PRIM1-208ENST00000552590 BSGP35613 385 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 ALDH3B1P43353 468 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 CLK3P49761 638 aaKnown RBP6.99□□□□□ -1.29
PRIM1-208ENST00000552590 HNMTP50135 292 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 GPX6P59796 221 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 MRPS11P82912 194 aaKnown RBP6.99□□□□□ -1.29
PRIM1-208ENST00000552590 ZBED6P86452 979 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 POU3F1Q03052 451 aaPredicted RBP6.99□□□□□ -1.29
PRIM1-208ENST00000552590 DHX34Q14147 1143 aaKnown RBP6.99□□□□□ -1.29
PRIM1-208ENST00000552590 PAGE2BQ5JRK9 111 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 OTUD3Q5T2D3 398 aaPredicted RBP6.99□□□□□ -1.29
PRIM1-208ENST00000552590 FAM205BPQ63HN1 556 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 ZFAND6Q6FIF0 208 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 Q6ZSV7 163 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 Q6ZTK2 550 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 SAMD14Q8IZD0 417 aaPredicted RBP6.99□□□□□ -1.29
PRIM1-208ENST00000552590 LYG1Q8N1E2 194 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 ESAMQ96AP7 390 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 NAP1L5Q96NT1 182 aaPredicted RBP6.99□□□□□ -1.29
PRIM1-208ENST00000552590 SERPINB12Q96P63 405 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 MRI1Q9BV20 369 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 CAPS2Q9BXY5 557 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 TBL1XR1Q9BZK7 514 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 PRDM13Q9H4Q3 707 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 FBXO5Q9UKT4 447 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 NOSIPQ9Y314 301 aaKnown RBP6.99□□□□□ -1.29
PRIM1-208ENST00000552590 WIPI2Q9Y4P8 454 aa6.99□□□□□ -1.29
PRIM1-208ENST00000552590 NPEPPSL1A6NEC2 478 aa6.98□□□□□ -1.29
PRIM1-208ENST00000552590 NCF1BA6NI72 391 aaPredicted RBP6.98□□□□□ -1.29
PRIM1-208ENST00000552590 OR6C65A6NJZ3 312 aa6.98□□□□□ -1.29
PRIM1-208ENST00000552590 NCF1CA8MVU1 366 aaPredicted RBP6.98□□□□□ -1.29
PRIM1-208ENST00000552590 PLATP00750 562 aa6.98□□□□□ -1.29
PRIM1-208ENST00000552590 NCF1P14598 390 aaPredicted RBP6.98□□□□□ -1.29
PRIM1-208ENST00000552590 VPS41P49754 854 aa6.98□□□□□ -1.29
PRIM1-208ENST00000552590 ZNF41P51814 821 aaPredicted RBP6.98□□□□□ -1.29
PRIM1-208ENST00000552590 RAC3P60763 192 aa6.98□□□□□ -1.29
PRIM1-208ENST00000552590 IRF8Q02556 426 aa6.98□□□□□ -1.29
PRIM1-208ENST00000552590 CHIT1Q13231 466 aa6.98□□□□□ -1.29
PRIM1-208ENST00000552590 LAPTM5Q13571 262 aa6.98□□□□□ -1.29
PRIM1-208ENST00000552590 HERPUD1Q15011 391 aa6.98□□□□□ -1.29
PRIM1-208ENST00000552590 MAD2L1BPQ15013 274 aaPredicted RBP6.98□□□□□ -1.29
PRIM1-208ENST00000552590 BRD3OSQ6XYD6 125 aa6.98□□□□□ -1.29
PRIM1-208ENST00000552590 Q6YL49 198 aa6.98□□□□□ -1.29
PRIM1-208ENST00000552590 ADGRG3Q86Y34 549 aa6.98□□□□□ -1.29
PRIM1-208ENST00000552590 CNTN4Q8IWV2 1026 aa6.98□□□□□ -1.29
PRIM1-208ENST00000552590 MRPL41Q8IXM3 137 aaKnown RBP6.98□□□□□ -1.29
PRIM1-208ENST00000552590 ZSCAN4Q8NAM6 433 aaPredicted RBP6.98□□□□□ -1.29
PRIM1-208ENST00000552590 ZNF527Q8NB42 609 aa6.98□□□□□ -1.29
PRIM1-208ENST00000552590 C1orf162Q8NEQ5 155 aaPredicted RBP6.98□□□□□ -1.29
PRIM1-208ENST00000552590 OR7G3Q8NG95 312 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms