RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 CNOT10Q9H9A5 744 aaKnown RBP4.4□□□□□ -1.71
SCAF11-214ENST00000550893 PNO1Q9NRX1 252 aaKnown RBP4.4□□□□□ -1.71
SCAF11-214ENST00000550893 STMN3Q9NZ72 180 aa4.4□□□□□ -1.71
SCAF11-214ENST00000550893 FLRT3Q9NZU0 649 aa4.4□□□□□ -1.71
SCAF11-214ENST00000550893 LRFN1Q9P244 771 aa4.4□□□□□ -1.71
SCAF11-214ENST00000550893 SLC17A7Q9P2U7 560 aa4.4□□□□□ -1.71
SCAF11-214ENST00000550893 C19orf25Q9UFG5 118 aaPredicted RBP4.4□□□□□ -1.71
SCAF11-214ENST00000550893 GIMAP2Q9UG22 337 aa4.4□□□□□ -1.71
SCAF11-214ENST00000550893 LGALS13Q9UHV8 139 aa4.4□□□□□ -1.71
SCAF11-214ENST00000550893 PROCRQ9UNN8 238 aa4.4□□□□□ -1.71
SCAF11-214ENST00000550893 ERVK-19Q9WJR5 959 aa4.4□□□□□ -1.71
SCAF11-214ENST00000550893 TIMM22Q9Y584 194 aa4.4□□□□□ -1.71
SCAF11-214ENST00000550893 NIPBLQ6KC79 2804 aaeCLIP4.4□□□□□ -1.71
SCAF11-214ENST00000550893 NAV3Q8IVL0 2385 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 A0A1B0GVC2 190 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 ANKDD1BA6NHY2 528 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 NPIPB13A6NJU9 1138 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 NPIPB5A8MRT5 1133 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 SYCE1LA8MT33 242 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 NPIPB4C9JG80 1138 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 PRR23D1E9PI22 279 aaPredicted RBP4.39□□□□□ -1.71
SCAF11-214ENST00000550893 RGS14O43566 566 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 TYROBPO43914 113 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 HS6ST1O60243 411 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 SLC19A2O60779 497 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 TOXO94900 526 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 CLDN9O95484 217 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 GPR75O95800 540 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 ATP1B1P05026 303 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 CHRNGP07510 517 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 INHBAP08476 426 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 SNRPAP09012 282 aaKnown RBP4.39□□□□□ -1.71
SCAF11-214ENST00000550893 ACAA1P09110 424 aaPredicted RBP4.39□□□□□ -1.71
SCAF11-214ENST00000550893 NUDT17P0C025 328 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 DHRS4L1P0CG22 281 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 PRR23D2P0DMB1 279 aaPredicted RBP4.39□□□□□ -1.71
SCAF11-214ENST00000550893 CT45A8P0DMV1 189 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 CT45A9P0DMV2 189 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 LYL1P12980 280 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 CPN2P22792 545 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 SERPINB1P30740 379 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 PIGAP37287 484 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 MAGEA5P43359 124 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 SLCO1A2P46721 670 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 ENTPD1P49961 510 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 NAGLUP54802 743 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 LTBQ06643 244 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 ASPHQ12797 758 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 ILF2Q12905 390 aaKnown RBP4.39□□□□□ -1.71
SCAF11-214ENST00000550893 EXOSC7Q15024 291 aaKnown RBP4.39□□□□□ -1.71
SCAF11-214ENST00000550893 NTRK2Q16620 822 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 TRMT12Q53H54 448 aaKnown RBP4.39□□□□□ -1.71
SCAF11-214ENST00000550893 CT45A2Q5DJT8 189 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 XKR7Q5GH72 579 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 NDUFAF5Q5TEU4 345 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 SCIMPQ6UWF3 145 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 Q6ZSR9 355 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 GPR180Q86V85 440 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 NUDT13Q86X67 352 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 LURAP1LQ8IV03 231 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 ST13P4Q8IZP2 240 aaPredicted RBP4.39□□□□□ -1.71
SCAF11-214ENST00000550893 CADM3Q8N126 398 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 C4orf33Q8N1A6 199 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 CYP4Z2PQ8N1L4 340 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 LRRC25Q8N386 305 aaPredicted RBP4.39□□□□□ -1.71
SCAF11-214ENST00000550893 DPP10Q8N608 796 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 SLC5A8Q8N695 610 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 C1orf52Q8N6N3 182 aaKnown RBP4.39□□□□□ -1.71
SCAF11-214ENST00000550893 BANPQ8N9N5 519 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 EIF1ADQ8N9N8 165 aaKnown RBP4.39□□□□□ -1.71
SCAF11-214ENST00000550893 MYRIPQ8NFW9 859 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 OR7G2Q8NG99 324 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 NUBPLQ8TB37 319 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 TRPC4APQ8TEL6 797 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 PAQR8Q8TEZ7 354 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 METTL21AQ8WXB1 218 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 TM9SF4Q92544 642 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 SPACA9Q96E40 222 aaPredicted RBP4.39□□□□□ -1.71
SCAF11-214ENST00000550893 GIMAP5Q96F15 307 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 EGLN2Q96KS0 407 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 C3orf30Q96M34 536 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 VSTM2LQ96N03 204 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 UTP23Q9BRU9 249 aaKnown RBP4.39□□□□□ -1.71
SCAF11-214ENST00000550893 CAPS2Q9BXY5 557 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 ITPAQ9BY32 194 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 OR8D2Q9GZM6 311 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 NXF5Q9H1B4 397 aaKnown RBP4.39□□□□□ -1.71
SCAF11-214ENST00000550893 RPF2Q9H7B2 306 aaKnown RBP4.39□□□□□ -1.71
SCAF11-214ENST00000550893 ACTR8Q9H981 624 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 NDUFAF4Q9P032 175 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 PSMC3IPQ9P2W1 217 aaPredicted RBP4.39□□□□□ -1.71
SCAF11-214ENST00000550893 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.39□□□□□ -1.71
SCAF11-214ENST00000550893 TBK1Q9UHD2 729 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 MEMO1Q9Y316 297 aa4.39□□□□□ -1.71
SCAF11-214ENST00000550893 V9GYY5 206 aaPredicted RBP4.39□□□□□ -1.71
SCAF11-214ENST00000550893 ANK2Q01484 3957 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 ROS1P08922 2347 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 A0A1B0GTH9 108 aa4.38□□□□□ -1.71
SCAF11-214ENST00000550893 DYTNA2CJ06 578 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms