RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 HK1P19367 917 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 PCMT1P22061 227 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 FKBP2P26885 142 aaKnown RBP12.3□□□□□ -0.44
PTCH1-215ENST00000547672 GSTT1P30711 240 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 SLC15A1P46059 708 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 EFNA3P52797 238 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 CRYZQ08257 329 aaKnown RBP12.3□□□□□ -0.44
PTCH1-215ENST00000547672 RAB40BQ12829 278 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 SNTA1Q13424 505 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 C1DQ13901 141 aaKnown RBP12.3□□□□□ -0.44
PTCH1-215ENST00000547672 TRIP6Q15654 476 aaKnown RBP12.3□□□□□ -0.44
PTCH1-215ENST00000547672 BTBD16Q32M84 506 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 CCDC157Q569K6 752 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 UBE2UQ5VVX9 321 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 FOXB2Q5VYV0 432 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 GTF2IRD2BQ6EKJ0 949 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 ATG4DQ86TL0 474 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-215ENST00000547672 GTF2IRD2Q86UP8 949 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 KIF18BQ86Y91 864 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 CCDC103Q8IW40 242 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 PRR22Q8IZ63 422 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 ANKK1Q8NFD2 765 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 ELP5Q8TE02 316 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 LIPHQ8WWY8 451 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 ST8SIA1Q92185 356 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 C3orf49Q96BT1 292 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 DTNBP1Q96EV8 351 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 LRR1Q96L50 414 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 SAMD8Q96LT4 415 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 IP6K3Q96PC2 410 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 NRSN2Q9GZP1 204 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 PAK1IP1Q9NWT1 392 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-215ENST00000547672 PISDQ9UG56 409 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 KLHL21Q9UJP4 597 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 FARSAQ9Y285 508 aaKnown RBP12.3□□□□□ -0.44
PTCH1-215ENST00000547672 SIGLEC7Q9Y286 467 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 YARS2Q9Y2Z4 477 aaKnown RBP12.3□□□□□ -0.44
PTCH1-215ENST00000547672 SLC6A5Q9Y345 797 aa12.3□□□□□ -0.44
PTCH1-215ENST00000547672 NSG1A0A0A6YYJ2 146 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 CDC14CA4D256 554 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 SURF4O15260 269 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 KLF7O75840 302 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-215ENST00000547672 OR7A10O76100 309 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 MT-ND2P03891 347 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 HTR1AP08908 422 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 FBXO45P0C2W1 286 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 PEPDP12955 493 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 MYL12AP19105 171 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 FUT1P19526 365 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 MAKP20794 623 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 NOS3P29474 1203 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 POLR2HP52434 150 aaKnown RBP12.29□□□□□ -0.44
PTCH1-215ENST00000547672 PCOLCEQ15113 449 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 SYT14P1Q58G82 188 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 GPR107Q5VW38 600 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 NXNL2Q5VZ03 156 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 LCN10Q6JVE6 187 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 ARHGAP11AQ6P4F7 1023 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 DPY19L2P2Q6ZN68 376 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 ZNF367Q7RTV3 350 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 MARCH3Q86UD3 253 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 NLGN4XQ8N0W4 816 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 FAR1Q8WVX9 515 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 TMIGD2Q96BF3 282 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 IMMP1LQ96LU5 166 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 ZNF582Q96NG8 517 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-215ENST00000547672 SIGLEC11Q96RL6 698 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 DOK1Q99704 481 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 IFT27Q9BW83 186 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 YIPF3Q9GZM5 350 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 LHPPQ9H008 270 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 MEPEQ9NQ76 525 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-215ENST00000547672 GPR83Q9NYM4 423 aa12.29□□□□□ -0.44
PTCH1-215ENST00000547672 ANKUB1A6NFN9 424 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 ENO4A6NNW6 628 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 KDM4EB2RXH2 506 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-215ENST00000547672 WWP2O00308 870 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 KPNA4O00629 521 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-215ENST00000547672 OR2T1O43869 369 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 PRKYO43930 277 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 PIP5K1CO60331 668 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 RAB36O95755 333 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 DLGAP3O95886 979 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 MT-ATP6P00846 226 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 IGFBP1P08833 259 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-215ENST00000547672 STSP08842 583 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 DBTP11182 482 aaKnown RBP12.28□□□□□ -0.44
PTCH1-215ENST00000547672 APEHP13798 732 aaKnown RBP12.28□□□□□ -0.44
PTCH1-215ENST00000547672 ZNF3P17036 446 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 TCN2P20062 427 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 CD82P27701 267 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 APOBEC1P41238 236 aaKnown RBP12.28□□□□□ -0.44
PTCH1-215ENST00000547672 CAPZA2P47755 286 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 MTNR1AP48039 350 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 PLAURQ03405 335 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 ZNF117Q03924 483 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 MFSD13AQ14CX5 517 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 CD226Q15762 336 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 TIMM50Q3ZCQ8 353 aa12.28□□□□□ -0.44
PTCH1-215ENST00000547672 CLEC12AQ5QGZ9 265 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms