RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 CLDN2P57739 230 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 TP53I3Q53FA7 332 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 C18orf63Q68DL7 685 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 RPL13AP3Q6NVV1 102 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 ZNF836Q6ZNA1 936 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 ZNF765Q7L2R6 523 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 RANBP3LQ86VV4 465 aaPredicted RBP13.15□□□□□ -0.3
SRP54-202ENST00000546080 HMGB4Q8WW32 186 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 CNOT9Q92600 299 aaKnown RBP13.15□□□□□ -0.3
SRP54-202ENST00000546080 KAT2AQ92830 837 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 PEX11GQ96HA9 241 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 DERL3Q96Q80 235 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 MACROD1Q9BQ69 325 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 PRSS27Q9BQR3 290 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 IFT46Q9NQC8 304 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 SPHK2Q9NRA0 654 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 C20orf141Q9NUB4 165 aa13.15□□□□□ -0.3
SRP54-202ENST00000546080 TET1Q8NFU7 2136 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 OR2M5A3KFT3 312 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 TRAPPC13A5PLN9 417 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 C4orf51C9J302 202 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 WDPCPO95876 746 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 PROS1P07225 676 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 FGF2P09038 288 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 UCHL1P09936 223 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 F3P13726 295 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 ANXA7P20073 488 aaKnown RBP13.14□□□□□ -0.31
SRP54-202ENST00000546080 LY6G5CQ5SRR4 150 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 B3GNTL1Q67FW5 361 aaPredicted RBP13.14□□□□□ -0.31
SRP54-202ENST00000546080 ZNF626Q68DY1 528 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 SLC48A1Q6P1K1 146 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 THSD4Q6ZMP0 1018 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 ACOT4Q8N9L9 421 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 BVESQ8NE79 360 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 TTLQ8NG68 377 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 TMEM239Q8WW34 195 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 SMIM19Q96E16 107 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 SLC35A4Q96G79 324 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 ZNF558Q96NG5 402 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 MENTQ9BUN1 341 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 NRIP3Q9NQ35 241 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 TAS2R5Q9NYW4 299 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 ZNF223Q9UK11 482 aaPredicted RBP13.14□□□□□ -0.31
SRP54-202ENST00000546080 WDR45Q9Y484 360 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 DENND4CQ5VZ89 1909 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 PDCD5O14737 125 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 ARPC5O15511 151 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 PPP3CBP16298 524 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 ZNF3P17036 446 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 SEC61A1P61619 476 aaKnown RBP13.14□□□□□ -0.31
SRP54-202ENST00000546080 CRMP1Q14194 572 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 CDK5R1Q15078 307 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 LTB4RQ15722 352 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 EIPR1Q53HC9 387 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 HES5Q5TA89 166 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 WDR88Q6ZMY6 472 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.14□□□□□ -0.316e-6■■■□□ 19.1
SRP54-202ENST00000546080 TMCO2Q7Z6W1 182 aaPredicted RBP13.14□□□□□ -0.31
SRP54-202ENST00000546080 UBE2Q1Q7Z7E8 422 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 CDK20Q8IZL9 346 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 SLC39A11Q8N1S5 342 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 EID2Q8N6I1 236 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 CYB561A3Q8NBI2 242 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 OR13C2Q8NGS9 318 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 OR4C6Q8NH72 309 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 FCAMRQ8WWV6 532 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 CDS1Q92903 461 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 SCLYQ96I15 445 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 OR14A2Q96R54 314 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 MFRPQ9BY79 579 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 MTHFD2LQ9H903 347 aaPredicted RBP13.14□□□□□ -0.31
SRP54-202ENST00000546080 CLDND1Q9NY35 253 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 KLK11Q9UBX7 282 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 SLC23A2Q9UGH3 650 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 FBXL4Q9UKA2 621 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 SLC35A3Q9Y2D2 325 aa13.14□□□□□ -0.31
SRP54-202ENST00000546080 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 TCRBV16S1A1N1A0A5B0 115 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 SYNDIG1LA6NDD5 238 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 DUXAA6NLW8 204 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 TEX46H3BTG2 121 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 H3BUI4 141 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 AIPO00170 330 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 OGG1O15527 345 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 NDUFA2O43678 99 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 OR2A4O95047 310 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 GYPBP06028 91 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 FCER2P06734 321 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 SLC2A5P22732 501 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 ZNF136P52737 540 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 POU4F2Q12837 409 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 GK2Q14410 553 aaPredicted RBP13.13□□□□□ -0.31
SRP54-202ENST00000546080 LINC00303Q3SY05 128 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 MRM1Q6IN84 353 aaKnown RBP13.13□□□□□ -0.31
SRP54-202ENST00000546080 NHLRC1Q6VVB1 395 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 TMUB2Q71RG4 321 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 NAXDQ8IW45 347 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 RNF113BQ8IZP6 322 aaKnown RBP13.13□□□□□ -0.31
SRP54-202ENST00000546080 STPG2Q8N412 459 aa13.13□□□□□ -0.31
SRP54-202ENST00000546080 RFLNBQ8N5W9 214 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms