RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 UGT2B7P16662 529 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 C5AR1P21730 350 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 PITPNBP48739 271 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 HEPHL1Q6MZM0 1159 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 FIGLAQ6QHK4 219 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 DUSP18Q8NEJ0 188 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 OR5M3Q8NGP4 307 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 OR2M4Q96R27 311 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 CHIAQ9BZP6 476 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 MED28Q9H204 178 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 SIGLEC7Q9Y286 467 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 RDH16O75452 317 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 HIST1H1CP16403 213 aaKnown RBP13.89□□□□□ -0.19
USP28-214ENST00000545540 HLA-DMAP28067 261 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 MAT1AQ00266 395 aaKnown RBP13.89□□□□□ -0.19
USP28-214ENST00000545540 KIAA1324Q6UXG2 1013 aaKnown RBP13.89□□□□□ -0.19
USP28-214ENST00000545540 OR2L13Q8N349 312 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 AKAP1Q92667 903 aaKnown RBP eCLIP13.89□□□□□ -0.19
USP28-214ENST00000545540 ADGRL4Q9HBW9 690 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 ZNF223Q9UK11 482 aaPredicted RBP13.89□□□□□ -0.19
USP28-214ENST00000545540 MGAT4AQ9UM21 535 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 COLEC10Q9Y6Z7 277 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 LTBP2Q14767 1821 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 A0A1B0GTH9 108 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 FAM86C2PA6NEL3 165 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 SEC14L5O43304 696 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 TFP02787 698 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 MT-ND5P03915 603 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 MAB21L1Q13394 359 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 GALEQ14376 348 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 ARHGAP11BQ3KRB8 267 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 C1orf53Q5VUE5 145 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 HBMQ6B0K9 141 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 FCRL6Q6DN72 434 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.89□□□□□ -0.19
USP28-214ENST00000545540 CDK20Q8IZL9 346 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 OR9A4Q8NGU2 314 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 ZNF671Q8TAW3 534 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 GAL3ST3Q96A11 431 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 FOXN4Q96NZ1 517 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 LMF1Q96S06 567 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 NMNAT3Q96T66 252 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 TIMM29Q9BSF4 260 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 KCNN2Q9H2S1 579 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 MED31Q9Y3C7 131 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 IER3IP1Q9Y5U9 82 aa13.89□□□□□ -0.19
USP28-214ENST00000545540 A0A1B0GWA3 101 aa13.88□□□□□ -0.19
USP28-214ENST00000545540 J3QRE1 110 aa13.88□□□□□ -0.19
USP28-214ENST00000545540 SELENOFO60613 162 aa13.88□□□□□ -0.19
USP28-214ENST00000545540 ERP29P30040 261 aaKnown RBP13.88□□□□□ -0.19
USP28-214ENST00000545540 TLX1P31314 330 aaPredicted RBP13.88□□□□□ -0.19
USP28-214ENST00000545540 BTCP35070 178 aa13.88□□□□□ -0.19
USP28-214ENST00000545540 RPL4P36578 427 aaKnown RBP13.88□□□□□ -0.19
USP28-214ENST00000545540 STPG1Q5TH74 334 aa13.88□□□□□ -0.19
USP28-214ENST00000545540 ZNF687Q8N1G0 1237 aa13.88□□□□□ -0.19
USP28-214ENST00000545540 ZNF619Q8N2I2 560 aa13.88□□□□□ -0.19
USP28-214ENST00000545540 OR52R1Q8NGF1 315 aa13.88□□□□□ -0.19
USP28-214ENST00000545540 THAP4Q8WY91 577 aa13.88□□□□□ -0.19
USP28-214ENST00000545540 MYADMQ96S97 322 aa13.88□□□□□ -0.19
USP28-214ENST00000545540 ERVMER34-1Q9H9K5 563 aa13.88□□□□□ -0.19
USP28-214ENST00000545540 CYSLTR2Q9NS75 346 aa13.88□□□□□ -0.19
USP28-214ENST00000545540 RIIAD1A6NNX1 92 aa13.88□□□□□ -0.19
USP28-214ENST00000545540 K7EQS6 105 aa13.88□□□□□ -0.19
USP28-214ENST00000545540 VASPP50552 380 aaPredicted RBP13.88□□□□□ -0.19
USP28-214ENST00000545540 SUZ12Q15022 739 aaKnown RBP13.88□□□□□ -0.19
USP28-214ENST00000545540 POMZP3Q6PJE2 187 aa13.88□□□□□ -0.19
USP28-214ENST00000545540 SLA2Q9H6Q3 261 aa13.88□□□□□ -0.19
USP28-214ENST00000545540 HCN3Q9P1Z3 774 aa13.88□□□□□ -0.19
USP28-214ENST00000545540 TMEM5Q9Y2B1 443 aa13.88□□□□□ -0.19
USP28-214ENST00000545540 CACNG2Q9Y698 323 aa13.88□□□□□ -0.19
USP28-214ENST00000545540 RTTNQ86VV8 2226 aa13.88□□□□□ -0.19
USP28-214ENST00000545540 ASXL3Q9C0F0 2248 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 C17orf51A8MQB3 221 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 CHP2O43745 196 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 NID1P14543 1247 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 SLC6A1P30531 599 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 GNG2P59768 71 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 ALG10BQ5I7T1 473 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 RFPL4BQ6ZWI9 263 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 OR8H3Q8N146 312 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 ZNF655Q8N720 491 aaPredicted RBP13.87□□□□□ -0.19
USP28-214ENST00000545540 OR7G1Q8NGA0 311 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 OR8K3Q8NH51 312 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 TRIM63Q969Q1 353 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 MOAP1Q96BY2 351 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 PITHD1Q9GZP4 211 aaPredicted RBP13.87□□□□□ -0.19
USP28-214ENST00000545540 DOCK8Q8NF50 2099 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 A0A0G2JK05 382 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 MCIDASD6RGH6 385 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 IGKV1D-16P01601 117 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 DUSP8Q13202 625 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 KCNAB1Q14722 419 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 SDE2Q6IQ49 451 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 C7orf61Q8IZ16 206 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 TOMM5Q8N4H5 51 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 RASD2Q96D21 266 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 SPACA7Q96KW9 195 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 TRPV4Q9HBA0 871 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 ASB6Q9NWX5 421 aa13.87□□□□□ -0.19
USP28-214ENST00000545540 POLHQ9Y253 713 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms