RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 EMDP50402 254 aa11.49□□□□□ -0.57
PAAF1-215ENST00000544909 PRPS1P60891 318 aa11.49□□□□□ -0.57
PAAF1-215ENST00000544909 SNRPNP63162 240 aaKnown RBP11.49□□□□□ -0.57
PAAF1-215ENST00000544909 PITPNAQ00169 270 aa11.49□□□□□ -0.57
PAAF1-215ENST00000544909 CRMP1Q14194 572 aa11.49□□□□□ -0.57
PAAF1-215ENST00000544909 CARTPTQ16568 116 aa11.49□□□□□ -0.57
PAAF1-215ENST00000544909 KLHL12Q53G59 568 aa11.49□□□□□ -0.57
PAAF1-215ENST00000544909 DPY19L2P2Q6ZN68 376 aa11.49□□□□□ -0.57
PAAF1-215ENST00000544909 SLITRK4Q8IW52 837 aa11.49□□□□□ -0.57
PAAF1-215ENST00000544909 TMEM52Q8NDY8 209 aa11.49□□□□□ -0.57
PAAF1-215ENST00000544909 RBM18Q96H35 190 aaKnown RBP11.49□□□□□ -0.57
PAAF1-215ENST00000544909 SENP5Q96HI0 755 aaPredicted RBP11.49□□□□□ -0.57
PAAF1-215ENST00000544909 ZNF285Q96NJ3 590 aa11.49□□□□□ -0.57
PAAF1-215ENST00000544909 CNN2Q99439 309 aaKnown RBP11.49□□□□□ -0.57
PAAF1-215ENST00000544909 ISG20L2Q9H9L3 353 aaKnown RBP11.49□□□□□ -0.57
PAAF1-215ENST00000544909 CERS4Q9HA82 394 aa11.49□□□□□ -0.57
PAAF1-215ENST00000544909 MCCC2Q9HCC0 563 aa11.49□□□□□ -0.57
PAAF1-215ENST00000544909 ING3Q9NXR8 418 aa11.49□□□□□ -0.57
PAAF1-215ENST00000544909 PTTG3PQ9NZH4 202 aa11.49□□□□□ -0.57
PAAF1-215ENST00000544909 FLRT3Q9NZU0 649 aa11.49□□□□□ -0.57
PAAF1-215ENST00000544909 ZMIZ1Q9ULJ6 1067 aa11.49□□□□□ -0.57
PAAF1-215ENST00000544909 FANCMQ8IYD8 2048 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 A0A087WUJ7 227 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.48□□□□□ -0.57
PAAF1-215ENST00000544909 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.48□□□□□ -0.57
PAAF1-215ENST00000544909 ZNF860A6NHJ4 632 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 CD8B2A6NJW9 211 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 TFECO14948 347 aaPredicted RBP11.48□□□□□ -0.57
PAAF1-215ENST00000544909 NTN1O95631 604 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 CT62P0C5K7 136 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 CD8BP10966 210 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 HSD17B7P56937 341 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 RPS7P62081 194 aaKnown RBP11.48□□□□□ -0.57
PAAF1-215ENST00000544909 RPS4XP62701 263 aaKnown RBP11.48□□□□□ -0.57
PAAF1-215ENST00000544909 FHL1Q13642 323 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 SERTAD2Q14140 314 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 P2RY14Q15391 338 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 CDONQ4KMG0 1287 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 FIGNL1Q6PIW4 674 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 PLCZ1Q86YW0 608 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 C19orf47Q8N9M1 422 aaKnown RBP11.48□□□□□ -0.57
PAAF1-215ENST00000544909 OR14A16Q8NHC5 309 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 ABHD4Q8TB40 342 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 RPS4Y2Q8TD47 263 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 SMPDL3BQ92485 455 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 CNOT9Q92600 299 aaKnown RBP11.48□□□□□ -0.57
PAAF1-215ENST00000544909 RIT1Q92963 219 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 TRIM63Q969Q1 353 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 RFT1Q96AA3 541 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 RNF170Q96K19 258 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 NDEL1Q9GZM8 345 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 MMP28Q9H239 520 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 SLC28A3Q9HAS3 691 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 B3GAT2Q9NPZ5 323 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 EXOSC3Q9NQT5 275 aaKnown RBP11.48□□□□□ -0.57
PAAF1-215ENST00000544909 EXTL2Q9UBQ6 330 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 PRODH2Q9UF12 536 aa11.48□□□□□ -0.57
PAAF1-215ENST00000544909 C2orf92A0A1B0GVN3 265 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 NOTOA8MTQ0 251 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 CTDSPLO15194 276 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 LRRTM2O43300 516 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 HYAL3O43820 417 aaPredicted RBP11.47□□□□□ -0.57
PAAF1-215ENST00000544909 UBL3O95164 117 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 C1QBP02746 253 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 PNMTP11086 282 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 PSKH1P11801 424 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 GABRG2P18507 467 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 ELK1P19419 428 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 FASLGP48023 281 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 GBX2P52951 348 aaPredicted RBP11.47□□□□□ -0.57
PAAF1-215ENST00000544909 VSX2P58304 361 aaPredicted RBP11.47□□□□□ -0.57
PAAF1-215ENST00000544909 HHEXQ03014 270 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 ZNF85Q03923 595 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 FUT7Q11130 342 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 EXOSC7Q15024 291 aaKnown RBP11.47□□□□□ -0.57
PAAF1-215ENST00000544909 CDK5R1Q15078 307 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 SF3B4Q15427 424 aaKnown RBP eCLIP11.47□□□□□ -0.577e-8■■■■■ 35
PAAF1-215ENST00000544909 SHHQ15465 462 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 KIAA0895LQ68EN5 471 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 RPL22L1Q6P5R6 122 aaKnown RBP11.47□□□□□ -0.57
PAAF1-215ENST00000544909 OVCH1Q7RTY7 1134 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 PRSS41Q7RTY9 318 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 DGLUCYQ7Z3D6 616 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 C11orf74Q86VG3 221 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 SLC22A18ASQ8N1D0 253 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 FAM71CQ8NEG0 241 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 OR13H1Q8NG92 308 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 OR7G1Q8NGA0 311 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 NACC2Q96BF6 587 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 SGTBQ96EQ0 304 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 TCTN2Q96GX1 697 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 C4orf36Q96KX1 117 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 GTPBP2Q9BX10 602 aaKnown RBP11.47□□□□□ -0.57
PAAF1-215ENST00000544909 HCAR1Q9BXC0 346 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 CHRDQ9H2X0 955 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 C12orf10Q9HB07 376 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 FBXO34Q9NWN3 711 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 EMC3Q9P0I2 261 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 RPS6KB2Q9UBS0 482 aa11.47□□□□□ -0.57
PAAF1-215ENST00000544909 SLC6A5Q9Y345 797 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms