RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 ADGRG3Q86Y34 549 aa17.17■□□□□ 0.34
DDX55-211ENST00000544429 LIX1LQ8IVB5 337 aa17.17■□□□□ 0.34
DDX55-211ENST00000544429 BHLHE22Q8NFJ8 381 aaPredicted RBP17.17■□□□□ 0.34
DDX55-211ENST00000544429 OR10D3Q8NH80 312 aa17.17■□□□□ 0.34
DDX55-211ENST00000544429 SMPDL3BQ92485 455 aa17.17■□□□□ 0.34
DDX55-211ENST00000544429 ZNF845Q96IR2 970 aaPredicted RBP17.17■□□□□ 0.34
DDX55-211ENST00000544429 TM9SF2Q99805 663 aa17.17■□□□□ 0.34
DDX55-211ENST00000544429 TMEM185BQ9H7F4 350 aa17.17■□□□□ 0.34
DDX55-211ENST00000544429 COQ10BQ9H8M1 238 aa17.17■□□□□ 0.34
DDX55-211ENST00000544429 PAQR5Q9NXK6 330 aaPredicted RBP17.17■□□□□ 0.34
DDX55-211ENST00000544429 ABCD2Q9UBJ2 740 aa17.17■□□□□ 0.34
DDX55-211ENST00000544429 ZNF629Q9UEG4 869 aaPredicted RBP17.17■□□□□ 0.34
DDX55-211ENST00000544429 PLEKHB1Q9UF11 243 aaPredicted RBP17.17■□□□□ 0.34
DDX55-211ENST00000544429 USP22Q9UPT9 525 aa17.17■□□□□ 0.34
DDX55-211ENST00000544429 AP3M1Q9Y2T2 418 aa17.17■□□□□ 0.34
DDX55-211ENST00000544429 PRORSD1PA6NEY8 169 aa17.16■□□□□ 0.34
DDX55-211ENST00000544429 FAM220BPB1ANY3 271 aa17.16■□□□□ 0.34
DDX55-211ENST00000544429 NME4O00746 187 aa17.16■□□□□ 0.34
DDX55-211ENST00000544429 EIF1AYO14602 144 aaKnown RBP17.16■□□□□ 0.34
DDX55-211ENST00000544429 SERPINB7O75635 380 aa17.16■□□□□ 0.34
DDX55-211ENST00000544429 GP1BBP13224 206 aa17.16■□□□□ 0.34
DDX55-211ENST00000544429 HTR3AP46098 478 aa17.16■□□□□ 0.34
DDX55-211ENST00000544429 NUDT2P50583 147 aa17.16■□□□□ 0.34
DDX55-211ENST00000544429 RPS3AP61247 264 aaKnown RBP17.16■□□□□ 0.34
DDX55-211ENST00000544429 TFF3Q07654 80 aa17.16■□□□□ 0.34
DDX55-211ENST00000544429 MERTKQ12866 999 aa17.16■□□□□ 0.34
DDX55-211ENST00000544429 GUSBP1Q15486 140 aa17.16■□□□□ 0.34
DDX55-211ENST00000544429 ERICH5Q6P6B1 374 aa17.16■□□□□ 0.34
DDX55-211ENST00000544429 ACBD4Q8NC06 268 aa17.16■□□□□ 0.34
DDX55-211ENST00000544429 OR10Q1Q8NGQ4 319 aa17.16■□□□□ 0.34
DDX55-211ENST00000544429 OR2V1Q8NHB1 315 aa17.16■□□□□ 0.34
DDX55-211ENST00000544429 ZNF563Q8TA94 476 aa17.16■□□□□ 0.34
DDX55-211ENST00000544429 FIG4Q92562 907 aa17.16■□□□□ 0.34
DDX55-211ENST00000544429 PINK1Q9BXM7 581 aa17.16■□□□□ 0.34
DDX55-211ENST00000544429 RNF122Q9H9V4 155 aa17.16■□□□□ 0.34
DDX55-211ENST00000544429 CACYBPQ9HB71 228 aaKnown RBP17.16■□□□□ 0.34
DDX55-211ENST00000544429 CTPS2Q9NRF8 586 aa17.16■□□□□ 0.34
DDX55-211ENST00000544429 A1L4Q6 167 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 SLC22A20A6NK97 555 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 CCT8L1PA6NM43 557 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 GJE1A6NN92 205 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 M0QX08 132 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 TNFSF11O14788 317 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 IL18BPO95998 194 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 IL2RAP01589 272 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 OPN1LWP04000 364 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 UQCRBP14927 111 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 SFTPDP35247 375 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 MAP2K6P52564 334 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 DUSP7Q16829 419 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 INTS11Q5TA45 600 aaKnown RBP17.15■□□□□ 0.34
DDX55-211ENST00000544429 PATL1Q86TB9 770 aaKnown RBP17.15■□□□□ 0.34
DDX55-211ENST00000544429 ARMC8Q8IUR7 673 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 FITM2Q8N6M3 262 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 LSMEM1Q8N8F7 131 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 GPR32P1Q8NGA4 272 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 FNDC9Q8TBE3 224 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 CA5BP1Q8WTZ4 195 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 SLC25A43Q8WUT9 341 aaPredicted RBP17.15■□□□□ 0.34
DDX55-211ENST00000544429 TAMM41Q96BW9 452 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 WFDC6Q9BQY6 131 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 PIF1Q9H611 641 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 EVA1AQ9H8M9 152 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 ARL8BQ9NVJ2 186 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 CHRNA9Q9UGM1 479 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 OSGIN1Q9UJX0 560 aa17.15■□□□□ 0.34
DDX55-211ENST00000544429 TMEM229AB2RXF0 380 aa17.14■□□□□ 0.33
DDX55-211ENST00000544429 SYT5O00445 386 aa17.14■□□□□ 0.33
DDX55-211ENST00000544429 FRS3O43559 492 aa17.14■□□□□ 0.33
DDX55-211ENST00000544429 CXCL13O43927 109 aa17.14■□□□□ 0.33
DDX55-211ENST00000544429 LGI1O95970 557 aa17.14■□□□□ 0.33
DDX55-211ENST00000544429 C8BP07358 591 aa17.14■□□□□ 0.33
DDX55-211ENST00000544429 CD247P20963 164 aa17.14■□□□□ 0.33
DDX55-211ENST00000544429 CTSSP25774 331 aa17.14■□□□□ 0.33
DDX55-211ENST00000544429 FKBP2P26885 142 aaKnown RBP17.14■□□□□ 0.33
DDX55-211ENST00000544429 EIF1AXP47813 144 aaKnown RBP17.14■□□□□ 0.33
DDX55-211ENST00000544429 KCNJ5P48544 419 aa17.14■□□□□ 0.33
DDX55-211ENST00000544429 POLR2HP52434 150 aaKnown RBP17.14■□□□□ 0.33
DDX55-211ENST00000544429 FOXF2Q12947 444 aa17.14■□□□□ 0.33
DDX55-211ENST00000544429 KRT72Q14CN4 511 aa17.14■□□□□ 0.33
DDX55-211ENST00000544429 PON3Q15166 354 aa17.14■□□□□ 0.33
DDX55-211ENST00000544429 TMEM176BQ3YBM2 270 aaPredicted RBP17.14■□□□□ 0.33
DDX55-211ENST00000544429 SYT14P1Q58G82 188 aa17.14■□□□□ 0.33
DDX55-211ENST00000544429 HBMQ6B0K9 141 aa17.14■□□□□ 0.33
DDX55-211ENST00000544429 WBP2NLQ6ICG8 309 aa17.14■□□□□ 0.33
DDX55-211ENST00000544429 CHMP1BQ7LBR1 199 aa17.14■□□□□ 0.33
DDX55-211ENST00000544429 RELL2Q8NC24 303 aaPredicted RBP17.14■□□□□ 0.33
DDX55-211ENST00000544429 SERINC1Q9NRX5 453 aa17.14■□□□□ 0.33
DDX55-211ENST00000544429 ZNF208O43345 1280 aa17.13■□□□□ 0.33
DDX55-211ENST00000544429 TPST2O60704 377 aa17.13■□□□□ 0.33
DDX55-211ENST00000544429 TNFSF13O75888 250 aa17.13■□□□□ 0.33
DDX55-211ENST00000544429 AQP8O94778 261 aa17.13■□□□□ 0.33
DDX55-211ENST00000544429 CRHP06850 196 aa17.13■□□□□ 0.33
DDX55-211ENST00000544429 TMIGD3P0DMS9 266 aaPredicted RBP17.13■□□□□ 0.33
DDX55-211ENST00000544429 HTR2AP28223 471 aa17.13■□□□□ 0.33
DDX55-211ENST00000544429 TACR3P29371 465 aa17.13■□□□□ 0.33
DDX55-211ENST00000544429 CLK1P49759 484 aaKnown RBP17.13■□□□□ 0.33
DDX55-211ENST00000544429 SLC7A2P52569 658 aa17.13■□□□□ 0.33
DDX55-211ENST00000544429 ZNF239Q16600 458 aaKnown RBP17.13■□□□□ 0.33
DDX55-211ENST00000544429 NRF1Q16656 503 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms