RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 KCMF1Q9P0J7 381 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 UBQLN2Q9UHD9 624 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 KCNK6Q9Y257 313 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 TRANK1O15050 2925 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 GRXCR1A8MXD5 290 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 AGRPO00253 132 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 GPRIN2O60269 458 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 PEX14O75381 377 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 PCDH8O95206 1070 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 ECDO95905 644 aaPredicted RBP12.69□□□□□ -0.38
VPS33A-208ENST00000543633 GUSBP08236 651 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 CD3GP09693 182 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 SLC35G6P0C7Q6 338 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 OR2T7P0C7T2 308 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 SMIM10L1P0DMW3 83 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 IL9P15248 144 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 ZNF10P21506 573 aaPredicted RBP12.69□□□□□ -0.38
VPS33A-208ENST00000543633 GBX2P52951 348 aaPredicted RBP12.69□□□□□ -0.38
VPS33A-208ENST00000543633 OR12D2P58182 307 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 AP3S2P59780 193 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 FAM20CQ8IXL6 584 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 OR8H3Q8N146 312 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 SPERTQ8NA61 448 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 ZNF527Q8NB42 609 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 OR13C2Q8NGS9 318 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 OR2T27Q8NH04 317 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 LRRC20Q8TCA0 184 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 ZFPM2Q8WW38 1151 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 ZNF707Q96C28 371 aaPredicted RBP12.69□□□□□ -0.38
VPS33A-208ENST00000543633 SMIM10Q96HG1 83 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 MAP6Q96JE9 813 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 C20orf141Q9NUB4 165 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 SPHK1Q9NYA1 384 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 DPP7Q9UHL4 492 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 SERTAD3Q9UJW9 196 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 OR1A2Q9Y585 309 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 COLEC10Q9Y6Z7 277 aa12.69□□□□□ -0.38
VPS33A-208ENST00000543633 SNRNP200O75643 2136 aaKnown RBP12.69□□□□□ -0.38
VPS33A-208ENST00000543633 PRRC2BQ5JSZ5 2229 aaKnown RBP12.69□□□□□ -0.38
VPS33A-208ENST00000543633 TRABD2BA6NFA1 517 aa12.68□□□□□ -0.38
VPS33A-208ENST00000543633 URADA6NGE7 173 aa12.68□□□□□ -0.38
VPS33A-208ENST00000543633 KHNYNO15037 678 aaKnown RBP12.68□□□□□ -0.38
VPS33A-208ENST00000543633 ADH1BP00325 375 aa12.68□□□□□ -0.38
VPS33A-208ENST00000543633 ZNF888P0CJ79 500 aaPredicted RBP12.68□□□□□ -0.38
VPS33A-208ENST00000543633 CPMP14384 443 aa12.68□□□□□ -0.38
VPS33A-208ENST00000543633 EPCAMP16422 314 aa12.68□□□□□ -0.38
VPS33A-208ENST00000543633 CXCL3P19876 107 aa12.68□□□□□ -0.38
VPS33A-208ENST00000543633 PYCR1P32322 319 aa12.68□□□□□ -0.38
VPS33A-208ENST00000543633 SNTB2Q13425 540 aaKnown RBP12.68□□□□□ -0.38
VPS33A-208ENST00000543633 CRMP1Q14194 572 aa12.68□□□□□ -0.38
VPS33A-208ENST00000543633 PDGFRLQ15198 375 aa12.68□□□□□ -0.38
VPS33A-208ENST00000543633 GPR68Q15743 365 aa12.68□□□□□ -0.38
VPS33A-208ENST00000543633 GRK1Q15835 563 aa12.68□□□□□ -0.38
VPS33A-208ENST00000543633 ST3GAL2Q16842 350 aa12.68□□□□□ -0.38
VPS33A-208ENST00000543633 OR5J2Q8NH18 312 aa12.68□□□□□ -0.38
VPS33A-208ENST00000543633 OR51Q1Q8NH59 317 aa12.68□□□□□ -0.38
VPS33A-208ENST00000543633 POF1BQ8WVV4 589 aa12.68□□□□□ -0.38
VPS33A-208ENST00000543633 ZNF426Q9BUY5 554 aa12.68□□□□□ -0.38
VPS33A-208ENST00000543633 ENKD1Q9H0I2 346 aa12.68□□□□□ -0.38
VPS33A-208ENST00000543633 OR51V1Q9H2C8 321 aa12.68□□□□□ -0.38
VPS33A-208ENST00000543633 C6orf106Q9H6K1 298 aaPredicted RBP12.68□□□□□ -0.38
VPS33A-208ENST00000543633 TMEM27Q9HBJ8 222 aa12.68□□□□□ -0.38
VPS33A-208ENST00000543633 ICAM5Q9UMF0 924 aa12.68□□□□□ -0.38
VPS33A-208ENST00000543633 PCDHGA9Q9Y5G4 932 aaKnown RBP12.68□□□□□ -0.38
VPS33A-208ENST00000543633 FKBP7Q9Y680 259 aa12.68□□□□□ -0.38
VPS33A-208ENST00000543633 CENPVL1A0A0U1RR11 272 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 A0A1B0GUH1 482 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 ZNF879B4DU55 563 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 PDCD5O14737 125 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 SULT1B1O43704 296 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 TPPPO94811 219 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 CEACAM5P06731 702 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 GDI2P50395 445 aaKnown RBP12.67□□□□□ -0.38
VPS33A-208ENST00000543633 MRPS10P82664 201 aaKnown RBP12.67□□□□□ -0.38
VPS33A-208ENST00000543633 DHODHQ02127 395 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 RPL6Q02878 288 aaKnown RBP12.67□□□□□ -0.38
VPS33A-208ENST00000543633 BAMBIQ13145 260 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 CST6Q15828 149 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 CDONQ4KMG0 1287 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 METTL11BQ5VVY1 283 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 RPL22L1Q6P5R6 122 aaKnown RBP12.67□□□□□ -0.38
VPS33A-208ENST00000543633 UNQ9370/PRO34162Q6UXP9 181 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 RTL4Q6ZR62 310 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 GRAMD2AQ8IUY3 354 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 PIAS4Q8N2W9 510 aaPredicted RBP12.67□□□□□ -0.38
VPS33A-208ENST00000543633 UXS1Q8NBZ7 420 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 THAP4Q8WY91 577 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 SLC22A18Q96BI1 424 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 TM4SF19Q96DZ7 209 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 SCARF2Q96GP6 870 aaPredicted RBP12.67□□□□□ -0.38
VPS33A-208ENST00000543633 MYADMQ96S97 322 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 C20orf85Q9H1P6 137 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 RSPH9Q9H1X1 276 aaPredicted RBP12.67□□□□□ -0.38
VPS33A-208ENST00000543633 SYNPO2LQ9H987 977 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 LYRM4Q9HD34 91 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 BRD7Q9NPI1 651 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 NRIP3Q9NQ35 241 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 NANSQ9NR45 359 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 MAT2BQ9NZL9 334 aa12.67□□□□□ -0.38
VPS33A-208ENST00000543633 RWDD3Q9Y3V2 267 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms