RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 CCRL2O00421 344 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 EEF1E1O43324 174 aaKnown RBP6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 PLRG1O43660 514 aaKnown RBP6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 CTNSO60931 367 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 TNFRSF6BO95407 300 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 SNAP29O95721 258 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 FCER2P06734 321 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 SDHBP21912 280 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 DPP4P27487 766 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 MPLP40238 635 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 PGFP49763 221 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 PAGE3Q5JUK9 113 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 YOD1Q5VVQ6 348 aaPredicted RBP6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 CPZQ66K79 652 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 C3P1Q6ZMU1 363 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 VRK3Q8IV63 474 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 LSMEM2Q8N112 164 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 OR51L1Q8NGJ5 315 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 NEIL3Q8TAT5 605 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 PATE1Q8WXA2 126 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 LCORQ96JN0 433 aaPredicted RBP6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 SLC46A1Q96NT5 459 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 MUS81Q96NY9 551 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 SPXQ9BT56 116 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 MS4A8Q9BY19 250 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 ACTR6Q9GZN1 396 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 DNTTIP1Q9H147 329 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 CNIH4Q9P003 139 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 LOXL2Q9Y4K0 774 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 ARID1BQ8NFD5 2236 aaPredicted RBP6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 TPRP12270 2363 aaKnown RBP6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 NME4O00746 187 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 HCRTR1O43613 425 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 CHP2O43745 196 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 B4GALT3O60512 393 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 GLB1P16278 677 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 SLC19A1P41440 591 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 MTNR1AP48039 350 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 TFF2Q03403 129 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 PMS2P11Q13670 270 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 APOFQ13790 326 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 CDK10Q15131 360 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 LCN8Q6JVE9 175 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF600Q6ZNG1 722 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 TRAPPC6BQ86SZ2 158 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 IGFN1Q86VF2 1251 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 DUSP19Q8WTR2 217 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 PCED1AQ9H1Q7 454 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 PAK1IP1Q9NWT1 392 aaPredicted RBP6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 TEX10Q9NXF1 929 aaPredicted RBP6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 KCNIP1Q9NZI2 227 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 VAPAQ9P0L0 249 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 NUFIP1Q9UHK0 495 aaKnown RBP6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 SCP2D1Q9UJQ7 156 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 SSC5DA1L4H1 1573 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 LOC102725191A0A1B0GVB3 256 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 A0A1W2PQ09 198 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 MKRN2OSH3BPM6 223 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 NARSO43776 548 aaKnown RBP6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 TNFSF15O95150 251 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 PRH1P02810 166 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 LCKP06239 509 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 TMEM225BP0DP42 221 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 GABRG2P18507 467 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 PTBP1P26599 531 aaKnown RBP eCLIP6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 OPRD1P41143 372 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 CSNK1G2P78368 415 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 POU3F1Q03052 451 aaPredicted RBP6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 LRRN1Q6UXK5 716 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 CEACAM19Q7Z692 300 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 SERPINA11Q86U17 422 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 CYB561A3Q8NBI2 242 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 IL17RDQ8NFM7 739 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 NETO1Q8TDF5 533 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 ACOT11Q8WXI4 607 aaPredicted RBP6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 THOC3Q96J01 351 aaKnown RBP6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 TRPV4Q9HBA0 871 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 FARSAQ9Y285 508 aaKnown RBP6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 ARGFXA6NJG6 315 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 TARM1B6A8C7 271 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 GPR37O15354 613 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 SYT7O43581 403 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 XPNPEP2O43895 674 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 MT-ND2P03891 347 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 SLC35E2P0CK97 266 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 PSKH1P11801 424 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 CKMT1AP12532 417 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 CFL1P23528 166 aaKnown RBP6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 CD1CP29017 333 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 CPOXP36551 454 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 TSFMP43897 325 aaKnown RBP6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 C17orf67Q0P5P2 114 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 SPEM2Q0P670 501 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 RSU1Q15404 277 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 CHRFAM7AQ494W8 412 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 TOR2AQ5JU69 321 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 LILRA6Q6PI73 481 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 Q6ZNB5 142 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 TMED4Q7Z7H5 227 aa6.43□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF554Q86TJ5 538 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms