RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 ZNF610Q8N9Z0 462 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 OR9I1Q8NGQ6 314 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 PNPT1Q8TCS8 783 aaKnown RBP8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ROBO4Q8WZ75 1007 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 VPS33AQ96AX1 596 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ZNF524Q96C55 264 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 REXO5Q96IC2 774 aaKnown RBP8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 GMPPAQ96IJ6 420 aaPredicted RBP8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 OPN3Q9H1Y3 402 aaPredicted RBP8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SLC38A1Q9H2H9 487 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 TPT1P8Q9HAU6 139 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SERINC1Q9NRX5 453 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 RASSF1Q9NS23 344 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SLC6A13Q9NSD5 602 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 THUMPD1Q9NXG2 353 aaKnown RBP8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ITGB1BP2Q9UKP3 347 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 PROCRQ9UNN8 238 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 EMC9Q9Y3B6 208 aa8.71□□□□□ -1.02
TNFRSF1A-214ENST00000543048 DSCAMO60469 2012 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SH3D21A4FU49 640 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 AGAP5A6NIR3 686 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CASKO14936 926 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SNX3O60493 162 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SS18L1O75177 396 aaPredicted RBP8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 PRKD3O94806 890 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 DBIP07108 87 aaKnown RBP8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CHRM4P08173 479 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 POU2F1P14859 743 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 IL7RP16871 459 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 FKBP2P26885 142 aaKnown RBP8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SHC1P29353 583 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 RYKP34925 604 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 APOBEC1P41238 236 aaKnown RBP8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CRATP43155 626 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 KCNJ5P48544 419 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 MVDP53602 400 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 RAC3P60763 192 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 MERTKQ12866 999 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SELENBP1Q13228 472 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 GNA13Q14344 377 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 RNPS1Q15287 305 aaKnown RBP8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 C6orf10Q5SRN2 563 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CGB2Q6NT52 195 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 FUNDC1Q8IVP5 155 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CMIPQ8IY22 773 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 PEX5LQ8IYB4 626 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 FAM71CQ8NEG0 241 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 OR6K3Q8NGY3 331 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ZNF563Q8TA94 476 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 GTF2H4Q92759 462 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CPNE4Q96A23 557 aaPredicted RBP8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ELAC2Q9BQ52 826 aaKnown RBP8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 EBF4Q9BQW3 602 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 GPATCH1Q9BRR8 931 aaKnown RBP8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SIKE1Q9BRV8 207 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 PAIP1Q9H074 479 aaKnown RBP8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CLEC4MQ9H2X3 399 aaPredicted RBP8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 RAD21L1Q9H4I0 556 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 NPHS2Q9NP85 383 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 EXOSC3Q9NQT5 275 aaKnown RBP8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 TMEM45AQ9NWC5 275 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CALML5Q9NZT1 146 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 KLHL14Q9P2G3 628 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 PRDM4Q9UKN5 801 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CLEC4AQ9UMR7 237 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 EDARQ9UNE0 448 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 PCDHB14Q9Y5E9 798 aa8.7□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ITPR3Q14573 2671 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 PRRC2AP48634 2157 aaKnown RBP8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ROS1P08922 2347 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 A0A096LPI6 279 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 TMEM247A6NEH6 219 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 C16orf97H3BN30 126 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CLIC1O00299 241 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 BCAS1O75363 584 aaPredicted RBP8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 GOSR1O95249 250 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 TFPTP0C1Z6 253 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ETFAP13804 333 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 NID1P14543 1247 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SLC7A1P30825 629 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 DNAJA1P31689 397 aaKnown RBP8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CPOXP36551 454 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CLK1P49759 484 aaKnown RBP8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ATP4BP51164 291 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 DSTNP60981 165 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 MAPK11Q15759 364 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 ZSWIM7Q19AV6 140 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 AGKQ53H12 422 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 FBXW10Q5XX13 1052 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SLC2A7Q6PXP3 512 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 DNAJC14Q6Y2X3 702 aaPredicted RBP8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 PLEKHM3Q6ZWE6 761 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 FCRLAQ7L513 359 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 PIGWQ7Z7B1 504 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 HMGN2P46Q86SG4 172 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CDC20BQ86Y33 519 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SLC43A2Q8N370 569 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 CCDC197Q8NCU1 140 aa8.69□□□□□ -1.02
TNFRSF1A-214ENST00000543048 SLC38A5Q8WUX1 472 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms