RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	VIPR2	P41587	438 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	GDI2	P50395	445 aa	Known RBP	11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	RPL6	Q02878	288 aa	Known RBP	11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	TMEM65	Q6PI78	240 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	BAIAP2L2	Q6UXY1	529 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	ZNF619	Q8N2I2	560 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	RSPRY1	Q96DX4	576 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	TEX101	Q9BY14	249 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	RBCK1	Q9BYM8	510 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	TBX21	Q9UL17	535 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	SPATA2	Q9UM82	520 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	PPIE	Q9UNP9	301 aa	Known RBP	11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	MAB21L2	Q9Y586	359 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	TBC1D3E	A0A087X179	549 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	SCAMP1	O15126	338 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	PEX14	O75381	377 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	ARL6IP5	O75915	188 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	ZNF888	P0CJ79	500 aa	Predicted RBP	11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	ACR	P10323	421 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	UBL4A	P11441	157 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	NT5E	P21589	574 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	BLVRA	P53004	296 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	ACTC1	P68032	377 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	ACTA1	P68133	377 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	POU6F2	P78424	691 aa	Predicted RBP	11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	AMZ1	Q400G9	498 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	PXDC1	Q5TGL8	231 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	TMPRSS11F	Q6ZWK6	438 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	LINGO2	Q7L985	606 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	CDH24	Q86UP0	819 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	SLITRK4	Q8IW52	837 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	ARL14	Q8N4G2	192 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	LSMEM1	Q8N8F7	131 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	LGALS14	Q8TCE9	139 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	SMIM4	Q8WVI0	70 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	RADIL	Q96JH8	1075 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	ERMAP	Q96PL5	475 aa	Predicted RBP	11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	ADAP2	Q9NPF8	381 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	NTM	Q9P121	344 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	RPS6KB2	Q9UBS0	482 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	PRELID1	Q9Y255	219 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	OTOL1	A6NHN0	477 aa	Predicted RBP	11.95	□□□□□ -0.5
DDX11-223	ENST00000542838		M0R233	179 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	PEX12	O00623	359 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	DBI	P07108	87 aa	Known RBP	11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	CSF2RA	P15509	400 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	SOX9	P48436	509 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	MFSD13A	Q14CX5	517 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	HDDC2	Q7Z4H3	204 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	BPHL	Q86WA6	291 aa	Predicted RBP	11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	OR2L13	Q8N349	312 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	OR4K14	Q8NGD5	310 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	PIGK	Q92643	395 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	HHIPL1	Q96JK4	782 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	FBXO34	Q9NWN3	711 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	USP36	Q9P275	1121 aa	Known RBP	11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	RCE1	Q9Y256	329 aa		11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	MRPS23	Q9Y3D9	190 aa	Known RBP	11.95	□□□□□ -0.5
DDX11-223	ENST00000542838	CTDSPL	O15194	276 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	GMDS	O60547	372 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	RRAS	P10301	218 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	EPCAM	P16422	314 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	CAPZA2	P47755	286 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	TSPAN5	P62079	268 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	SNRPN	P63162	240 aa	Known RBP	11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	SIM1	P81133	766 aa	Predicted RBP	11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	TRMT12	Q53H54	448 aa	Known RBP	11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	DCST2	Q5T1A1	773 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	CMTM4	Q8IZR5	234 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	MRPL43	Q8N983	215 aa	Known RBP	11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	GRHL3	Q8TE85	626 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	GAL3ST3	Q96A11	431 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	OR14A2	Q96R54	314 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	SARG	Q9BW04	601 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	C1QTNF7	Q9BXJ2	289 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	CHIA	Q9BZP6	476 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	ZNF350	Q9GZX5	532 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	OR10A4	Q9H209	315 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	ZCCHC4	Q9H5U6	513 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	MEPE	Q9NQ76	525 aa	Predicted RBP	11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	PRSS16	Q9NQE7	514 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	NPTN	Q9Y639	398 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838		G3V3Q6	166 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	NARS	O43776	548 aa	Known RBP	11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	PAK4	O96013	591 aa	Predicted RBP	11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	GNRH1	P01148	92 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	LINC00271	P0C7V0	271 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	NID1	P14543	1247 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	GBX2	P52951	348 aa	Predicted RBP	11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	TNFRSF17	Q02223	184 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	CDK5R1	Q15078	307 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	IRF4	Q15306	451 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	RPE65	Q16518	533 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	UBE2NL	Q5JXB2	153 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838		Q6ZTK2	550 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	CHMP1B	Q7LBR1	199 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	GALNT11	Q8NCW6	608 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	SLC2A12	Q8TD20	617 aa		11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	GCDH	Q92947	438 aa	Predicted RBP	11.94	□□□□□ -0.5
DDX11-223	ENST00000542838	SMIM19	Q96E16	107 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms