RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 CRISP1P54107 249 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 SOX8P57073 446 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 ISL1P61371 349 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 IL1RL1Q01638 556 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 TSPAN31Q12999 210 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 AIMP2Q13155 320 aaKnown RBP8.42□□□□□ -1.06
LDHA-220ENST00000542179 CBFBQ13951 182 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 TGIF1Q15583 401 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 MEP1AQ16819 746 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 ZNF691Q5VV52 312 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 WDR88Q6ZMY6 472 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 TMPRSS11FQ6ZWK6 438 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 NRMQ8IXM6 262 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 CADM2Q8N3J6 435 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 SETD9Q8NE22 299 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 OR10G3Q8NGC4 313 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 B4GALNT2Q8NHY0 566 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 PAQR8Q8TEZ7 354 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 FBLIM1Q8WUP2 373 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 TMEM255BQ8WV15 326 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 ASB15Q8WXK1 588 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 THAP4Q8WY91 577 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 C3orf49Q96BT1 292 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 NXPE2Q96DL1 559 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 MUS81Q96NY9 551 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 ANGPTL4Q9BY76 406 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 SLC19A3Q9BZV2 496 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 RIBC2Q9H4K1 309 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 PNPLA3Q9NST1 481 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 SELENONQ9NZV5 590 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 CNIH4Q9P003 139 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 TMEM5Q9Y2B1 443 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 MED31Q9Y3C7 131 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 PCDHGB6Q9Y5F9 930 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 CHCHD2Q9Y6H1 151 aaPredicted RBP8.42□□□□□ -1.06
LDHA-220ENST00000542179 ACACBO00763 2458 aa8.42□□□□□ -1.06
LDHA-220ENST00000542179 DCDC2BA2VCK2 349 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 MAGEA13PA6NCF6 341 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 TRABD2BA6NFA1 517 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 ANKUB1A6NFN9 424 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 ZAR1LA6NP61 321 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 ETV2O00321 342 aaPredicted RBP8.41□□□□□ -1.06
LDHA-220ENST00000542179 BCKDKO14874 412 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 SCO2O43819 266 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 CDC40O60508 579 aaKnown RBP eCLIP8.41□□□□□ -1.06
LDHA-220ENST00000542179 CLIC3O95833 236 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 TP53P04637 393 aaPredicted RBP8.41□□□□□ -1.06
LDHA-220ENST00000542179 RPSAP08865 295 aaKnown RBP8.41□□□□□ -1.06
LDHA-220ENST00000542179 CHMP24386 653 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 MST1P26927 711 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 EPHA2P29317 976 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 HTR3AP46098 478 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 CHN2P52757 468 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 FOXD4Q12950 439 aaPredicted RBP8.41□□□□□ -1.06
LDHA-220ENST00000542179 COL28A1Q2UY09 1125 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 TBC1D25Q3MII6 688 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 ACER2Q5QJU3 275 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 KRT80Q6KB66 452 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 TTC33Q6PID6 262 aaPredicted RBP8.41□□□□□ -1.06
LDHA-220ENST00000542179 IL20RBQ6UXL0 311 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 RTL4Q6ZR62 310 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 RASSF6Q6ZTQ3 369 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 THAP5Q7Z6K1 395 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 ATG4DQ86TL0 474 aaPredicted RBP8.41□□□□□ -1.06
LDHA-220ENST00000542179 CDK20Q8IZL9 346 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 C8orf59Q8N0T1 100 aaPredicted RBP8.41□□□□□ -1.06
LDHA-220ENST00000542179 TMEM156Q8N614 296 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 TMCO5AQ8N6Q1 288 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 CLDN22Q8N7P3 220 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 OR5M3Q8NGP4 307 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 ZNF563Q8TA94 476 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 BRIX1Q8TDN6 353 aaKnown RBP8.41□□□□□ -1.06
LDHA-220ENST00000542179 GPR119Q8TDV5 335 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 TMEM234Q8WY98 164 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 ST8SIA1Q92185 356 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 THOC3Q96J01 351 aaKnown RBP8.41□□□□□ -1.06
LDHA-220ENST00000542179 GPA33Q99795 319 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 APOL4Q9BPW4 351 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 TMEM43Q9BTV4 400 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 YTHDF1Q9BYJ9 559 aaKnown RBP8.41□□□□□ -1.06
LDHA-220ENST00000542179 LHPPQ9H008 270 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 METTL7AQ9H8H3 244 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 KLRF1Q9NZS2 232 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 TEKT2Q9UIF3 430 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 GMPPBQ9Y5P6 360 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 WIF1Q9Y5W5 379 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 RIF1Q5UIP0 2472 aaKnown RBP8.41□□□□□ -1.06
LDHA-220ENST00000542179 GVINP1Q7Z2Y8 2422 aa8.41□□□□□ -1.06
LDHA-220ENST00000542179 FAM186AA6NE01 2351 aa8.4□□□□□ -1.06
LDHA-220ENST00000542179 PTPRZ1P23471 2315 aaPredicted RBP8.4□□□□□ -1.06
LDHA-220ENST00000542179 TRIM64A6NGJ6 449 aa8.4□□□□□ -1.06
LDHA-220ENST00000542179 MASP2O00187 686 aa8.4□□□□□ -1.06
LDHA-220ENST00000542179 SNX4O95219 450 aa8.4□□□□□ -1.06
LDHA-220ENST00000542179 NTN1O95631 604 aa8.4□□□□□ -1.06
LDHA-220ENST00000542179 LYNP07948 512 aa8.4□□□□□ -1.06
LDHA-220ENST00000542179 IFI30P13284 250 aa8.4□□□□□ -1.06
LDHA-220ENST00000542179 ITPKBP27987 946 aa8.4□□□□□ -1.06
LDHA-220ENST00000542179 TACR3P29371 465 aa8.4□□□□□ -1.06
LDHA-220ENST00000542179 GGT2P36268 569 aa8.4□□□□□ -1.06
LDHA-220ENST00000542179 HLCSP50747 726 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms