RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 CLEC4MQ9H2X3 399 aaPredicted RBP8.93□□□□□ -0.98
CDH13-204ENST00000539548 KIR3DX1Q9H7L2 352 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 BRD7Q9NPI1 651 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 PRDM9Q9NQV7 894 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 THAP10Q9P2Z0 257 aaPredicted RBP8.93□□□□□ -0.98
CDH13-204ENST00000539548 KCNE5Q9UJ90 142 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 SPEF1Q9Y4P9 236 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 A0A1B0GTQ1 180 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 RPS10-NUDT3A0A1W2PQS6 291 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 A0A1W2PRG6 482 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 MID1O15344 667 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 ZNF749O43361 778 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 SSNA1O43805 119 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 MPC2O95563 127 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 PAK4O96013 591 aaPredicted RBP8.93□□□□□ -0.98
CDH13-204ENST00000539548 TIMP1P01033 207 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 MT-ND4P03905 459 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 WNT1P04628 370 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 CPMP14384 443 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 TYRP1P17643 537 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 ENPP1P22413 925 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 GBX2P52951 348 aaPredicted RBP8.93□□□□□ -0.98
CDH13-204ENST00000539548 SRP54P61011 504 aaKnown RBP8.93□□□□□ -0.98
CDH13-204ENST00000539548 EXOSC2Q13868 293 aaKnown RBP8.93□□□□□ -0.98
CDH13-204ENST00000539548 CAMK1Q14012 370 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 FGL2Q14314 439 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 POU4F3Q15319 338 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 TRMT12Q53H54 448 aaKnown RBP8.93□□□□□ -0.98
CDH13-204ENST00000539548 RNASE12Q5GAN4 147 aaKnown RBP8.93□□□□□ -0.98
CDH13-204ENST00000539548 FAM69AQ5T7M9 428 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 FCRLBQ6BAA4 426 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 ZNF613Q6PF04 617 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 UNQ9370/PRO34162Q6UXP9 181 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 RTL4Q6ZR62 310 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 SSX6Q7RTT6 188 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 SLITRK4Q8IW52 837 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 OR4N5Q8IXE1 308 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 SYS1Q8N2H4 156 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 CYB561A3Q8NBI2 242 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 SMAP2Q8WU79 429 aaPredicted RBP8.93□□□□□ -0.98
CDH13-204ENST00000539548 PEX11GQ96HA9 241 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 SERINC2Q96SA4 455 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 ZNF559Q9BR84 538 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 ZNF436Q9C0F3 470 aaPredicted RBP8.93□□□□□ -0.98
CDH13-204ENST00000539548 EVA1AQ9H8M9 152 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 PLEKHA1Q9HB21 404 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 ZDHHC4Q9NPG8 344 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 MEPEQ9NQ76 525 aaPredicted RBP8.93□□□□□ -0.98
CDH13-204ENST00000539548 NANSQ9NR45 359 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 UBQLN2Q9UHD9 624 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 FBXL4Q9UKA2 621 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 FBXL21Q9UKT6 434 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 CLEC4AQ9UMR7 237 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 SLC17A4Q9Y2C5 497 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 INSL6Q9Y581 213 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 PCDHGA9Q9Y5G4 932 aaKnown RBP8.93□□□□□ -0.98
CDH13-204ENST00000539548 HEBP2Q9Y5Z4 205 aa8.93□□□□□ -0.98
CDH13-204ENST00000539548 TRAV27A0A087WT01 109 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 A0A0B4J203 849 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 PEX12O00623 359 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 KHNYNO15037 678 aaKnown RBP8.92□□□□□ -0.98
CDH13-204ENST00000539548 PRAF2O60831 178 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 PEX14O75381 377 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 PPP1R3DO95685 299 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 TGM6O95932 706 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 IFNGP01579 166 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 HPXP02790 462 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 OR2T7P0C7T2 308 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 CCL5P13501 91 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 TLX1P31314 330 aaPredicted RBP8.92□□□□□ -0.98
CDH13-204ENST00000539548 GDI2P50395 445 aaKnown RBP8.92□□□□□ -0.98
CDH13-204ENST00000539548 ZNF81P51508 661 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 EPHA4P54764 986 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 ZP1P60852 638 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 RPS11P62280 158 aaKnown RBP eCLIP8.92□□□□□ -0.98
CDH13-204ENST00000539548 SIRPAP78324 504 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 PUDPQ08623 228 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 RUNX2Q13950 521 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 CDK5R1Q15078 307 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 TP53I3Q53FA7 332 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 UBE2NLQ5JXB2 153 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 RPL22L1Q6P5R6 122 aaKnown RBP8.92□□□□□ -0.98
CDH13-204ENST00000539548 PRSS45Q7RTY3 260 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 DGLUCYQ7Z3D6 616 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 GLRX5Q86SX6 157 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 LSRQ86X29 649 aaPredicted RBP8.92□□□□□ -0.98
CDH13-204ENST00000539548 ZNF527Q8NB42 609 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 BEST4Q8NFU0 473 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 OR6C4Q8NGE1 309 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 OR2T27Q8NH04 317 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 OR51A7Q8NH64 312 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 SPPL3Q8TCT6 385 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 ZNF296Q8WUU4 475 aaPredicted RBP8.92□□□□□ -0.98
CDH13-204ENST00000539548 POF1BQ8WVV4 589 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 PHYHIPQ92561 330 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 TM4SF19Q96DZ7 209 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 SMIM19Q96E16 107 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 PELI1Q96FA3 418 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 TNFRSF13CQ96RJ3 184 aa8.92□□□□□ -0.98
CDH13-204ENST00000539548 STACQ99469 402 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms