RNA–Protein interactions for RNA: ENST00000539271.5

LRTOMT-216, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 4 BASIC

Gene LRTOMT, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-216ENST00000539271 CCDC106Q9BWC9 280 aa8.05□□□□□ -1.12
LRTOMT-216ENST00000539271 PIGMQ9H3S5 423 aa8.05□□□□□ -1.12
LRTOMT-216ENST00000539271 TMEM38AQ9H6F2 299 aa8.05□□□□□ -1.12
LRTOMT-216ENST00000539271 COQ10BQ9H8M1 238 aa8.05□□□□□ -1.12
LRTOMT-216ENST00000539271 RLIMQ9NVW2 624 aa8.05□□□□□ -1.12
LRTOMT-216ENST00000539271 FOXD3Q9UJU5 478 aaPredicted RBP8.05□□□□□ -1.12
LRTOMT-216ENST00000539271 MCTS1Q9ULC4 181 aaKnown RBP8.05□□□□□ -1.12
LRTOMT-216ENST00000539271 ZNF443Q9Y2A4 671 aaPredicted RBP8.05□□□□□ -1.12
LRTOMT-216ENST00000539271 IFT52Q9Y366 437 aa8.05□□□□□ -1.12
LRTOMT-216ENST00000539271 CHST2Q9Y4C5 530 aa8.05□□□□□ -1.12
LRTOMT-216ENST00000539271 ANKRD17O75179 2603 aaKnown RBP8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 CFAP73A6NFT4 308 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 EEF1E1-BLOC1S5C9J1V9 151 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 SLC22A2O15244 555 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 EEF1E1O43324 174 aaKnown RBP8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 SYNGR4O95473 234 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 PABPC4LP0CB38 370 aaKnown RBP8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 ETS2P15036 469 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 UQCRC1P31930 480 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 APOBEC1P41238 236 aaKnown RBP8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 ACAA2P42765 397 aaKnown RBP8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 KIR2DL2P43627 348 aaPredicted RBP8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 IDH2P48735 452 aaKnown RBP8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 MTPNP58546 118 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 NFYCQ13952 458 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 SELPLGQ14242 412 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 MAPRE2Q15555 327 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 ZNF239Q16600 458 aaKnown RBP8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 TRMT5Q32P41 509 aaKnown RBP8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 COQ5Q5HYK3 327 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 REEP3Q6NUK4 255 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 VWA1Q6PCB0 445 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 GDF7Q7Z4P5 450 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 CLIP4Q8N3C7 705 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 CNEP1R1Q8N9A8 125 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 ATP6V1C2Q8NEY4 427 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 ZNF563Q8TA94 476 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 SLC25A43Q8WUT9 341 aaPredicted RBP8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 CPNE4Q96A23 557 aaPredicted RBP8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 STARD4Q96DR4 205 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 LRRC46Q96FV0 321 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 SPATA9Q9BWV2 254 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 RSPO3Q9BXY4 272 aaPredicted RBP8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 SRXN1Q9BYN0 137 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 PRRG4Q9BZD6 226 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 CACYBPQ9HB71 228 aaKnown RBP8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 TIGARQ9NQ88 270 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 CTPS2Q9NRF8 586 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 SERINC1Q9NRX5 453 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 CHRNA9Q9UGM1 479 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 PRDM4Q9UKN5 801 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 PACSIN3Q9UKS6 424 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 ZNF232Q9UNY5 417 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 CAPN7Q9Y6W3 813 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 ROS1P08922 2347 aa8.04□□□□□ -1.12
LRTOMT-216ENST00000539271 A0A1W2PNR3 127 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 BBIP1A8MTZ0 92 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 A8MXE2 369 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 FXYD1O00168 92 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 DYNC1I1O14576 645 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 MSTNO14793 375 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 SS18L1O75177 396 aaPredicted RBP8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 CGAP01215 116 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 GKN3PP0CG01 181 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 UQCRBP14927 111 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 SLC6A2P23975 617 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 FKBP2P26885 142 aaKnown RBP8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 SLC7A1P30825 629 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 SSTR2P30874 369 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 PRKAR1BP31321 381 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 PEX19P40855 299 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 SLC1A3P43003 542 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 HTR3AP46098 478 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 RAC3P60763 192 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 SIRPAP78324 504 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 RBBP4Q09028 425 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 SCARB2Q14108 478 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 CAPRIN1Q14444 709 aaKnown RBP8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 SYT14P1Q58G82 188 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 ZNF311Q5JNZ3 666 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 REP15Q6BDI9 236 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 PPP4R4Q6NUP7 873 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 FAM214BQ7L5A3 538 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 ZNF550Q7Z398 422 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 NET1Q7Z628 596 aaPredicted RBP8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 BTLAQ7Z6A9 289 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 SNX32Q86XE0 403 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 ADGRG3Q86Y34 549 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 PTOV1Q86YD1 416 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 C11orf65Q8NCR3 313 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 HIPK4Q8NE63 616 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 RNF128Q8TEB7 428 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 ROBO4Q8WZ75 1007 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 SLC35B4Q969S0 331 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 C14orf79Q96F83 325 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 GMPPAQ96IJ6 420 aaPredicted RBP8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 OR5B2Q96R09 309 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 RBM24Q9BX46 236 aaKnown RBP8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 ADAM19Q9H013 955 aa8.03□□□□□ -1.12
LRTOMT-216ENST00000539271 ARMC7Q9H6L4 198 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms