RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 COPZ1P61923 177 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 DCDP81605 110 aaKnown RBP12.92□□□□□ -0.34
ACTN1-205ENST00000538545 FOXK2Q01167 660 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 TEKQ02763 1124 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 SKP2Q13309 424 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 ANGPT1Q15389 498 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 ZNF791Q3KP31 576 aaPredicted RBP12.92□□□□□ -0.34
ACTN1-205ENST00000538545 ZNF362Q5T0B9 420 aaPredicted RBP12.92□□□□□ -0.34
ACTN1-205ENST00000538545 AADACL4Q5VUY2 407 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 PEAR1Q5VY43 1037 aaPredicted RBP12.92□□□□□ -0.34
ACTN1-205ENST00000538545 ULK3Q6PHR2 472 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 MRGPREQ86SM8 312 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 LSMEM1Q8N8F7 131 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 NAT6Q93015 286 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 MOGAT1Q96PD6 335 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 ZNF426Q9BUY5 554 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 GALNT9Q9HCQ5 603 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 EXOSC4Q9NPD3 245 aaKnown RBP12.92□□□□□ -0.34
ACTN1-205ENST00000538545 SRPK3Q9UPE1 567 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 IGKV1D-42A0A075B6H8 117 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 MCIDASD6RGH6 385 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 MEN1O00255 615 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 CSTF2P33240 577 aaKnown RBP eCLIP12.92□□□□□ -0.34
ACTN1-205ENST00000538545 TGM4P49221 684 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 BMXP51813 675 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 FBXW4P57775 412 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 SPHARQ15513 63 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 ZNF385CQ66K41 422 aaPredicted RBP12.92□□□□□ -0.34
ACTN1-205ENST00000538545 SLC23A3Q6PIS1 610 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 CXXC5Q7LFL8 322 aaKnown RBP12.92□□□□□ -0.34
ACTN1-205ENST00000538545 SLC29A4Q7RTT9 530 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 ZNF550Q7Z398 422 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 CDK20Q8IZL9 346 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 SDR9C7Q8NEX9 313 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 ZNF563Q8TA94 476 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 ZPLD1Q8TCW7 415 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 PTP4A1Q93096 173 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 ZHX1-C8orf76Q96EF9 292 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 SPSB2Q99619 263 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 KLHL1Q9NR64 748 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 SEC14L4Q9UDX3 406 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 ZNF346Q9UL40 294 aaKnown RBP12.92□□□□□ -0.34
ACTN1-205ENST00000538545 HRH3Q9Y5N1 445 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 hCG_2014768A0A024R1R8 64 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 FAM86C2PA6NEL3 165 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 ZNF264O43296 627 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 CDC40O60508 579 aaKnown RBP eCLIP12.91□□□□□ -0.34
ACTN1-205ENST00000538545 CER1O95813 267 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 ATP6V1E1P36543 226 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 OPRL1P41146 370 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 HCCSP53701 268 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 RNF4P78317 190 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 CRMP1Q14194 572 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 PAPD4Q6PIY7 484 aaKnown RBP12.91□□□□□ -0.34
ACTN1-205ENST00000538545 TMPRSS11FQ6ZWK6 438 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 ATCAYQ86WG3 371 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 C10orf53Q8N6V4 93 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 OR52L1Q8NGH7 329 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 OR4K13Q8NH42 304 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 OR14A16Q8NHC5 309 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 DCSTAMPQ9H295 470 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 CCDC86Q9H6F5 360 aaKnown RBP12.91□□□□□ -0.34
ACTN1-205ENST00000538545 PCNX2A6NKB5 2137 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 LNP1A1A4G5 178 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 BLOC1S5-TXNDC5H3BN57 136 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 MYL12BO14950 172 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 TOX3O15405 576 aaPredicted RBP12.91□□□□□ -0.34
ACTN1-205ENST00000538545 MAGEB4O15481 346 aaPredicted RBP12.91□□□□□ -0.34
ACTN1-205ENST00000538545 GPX5O75715 221 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 ANKRD34CP0C6C1 535 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 GALNSP34059 522 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 EMP2P54851 167 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 RPS7P62081 194 aaKnown RBP12.91□□□□□ -0.34
ACTN1-205ENST00000538545 INSL4Q14641 139 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 AP1ARQ63HQ0 302 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 LYPD4Q6UWN0 246 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 LINC00114Q6XXX2 140 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 RABEPKQ7Z6M1 372 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 SLC15A4Q8N697 577 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 NANOGP1Q8N7R0 232 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 RHBDD1Q8TEB9 315 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 WDR77Q9BQA1 342 aaPredicted RBP12.91□□□□□ -0.34
ACTN1-205ENST00000538545 CRB3Q9BUF7 120 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 TOR4AQ9NXH8 423 aa12.91□□□□□ -0.34
ACTN1-205ENST00000538545 A0A087WUJ7 227 aa12.9□□□□□ -0.34
ACTN1-205ENST00000538545 PTP4A3O75365 173 aa12.9□□□□□ -0.34
ACTN1-205ENST00000538545 RAB36O95755 333 aa12.9□□□□□ -0.34
ACTN1-205ENST00000538545 LIMS3P0CW19 117 aa12.9□□□□□ -0.34
ACTN1-205ENST00000538545 LIMS4P0CW20 117 aa12.9□□□□□ -0.34
ACTN1-205ENST00000538545 PIPP12273 146 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-205ENST00000538545 EGR4Q05215 589 aa12.9□□□□□ -0.34
ACTN1-205ENST00000538545 NCF4Q15080 339 aa12.9□□□□□ -0.34
ACTN1-205ENST00000538545 SF3A2Q15428 464 aaKnown RBP12.9□□□□□ -0.34
ACTN1-205ENST00000538545 OTPQ5XKR4 325 aa12.9□□□□□ -0.34
ACTN1-205ENST00000538545 ALDH16A1Q8IZ83 802 aa12.9□□□□□ -0.34
ACTN1-205ENST00000538545 RNF113BQ8IZP6 322 aaKnown RBP12.9□□□□□ -0.34
ACTN1-205ENST00000538545 PLPP5Q8NEB5 264 aa12.9□□□□□ -0.34
ACTN1-205ENST00000538545 MOSPD2Q8NHP6 518 aa12.9□□□□□ -0.34
ACTN1-205ENST00000538545 DYNC2LI1Q8TCX1 351 aa12.9□□□□□ -0.34
ACTN1-205ENST00000538545 ZNRF4Q8WWF5 429 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms