RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 SEC14L5O43304 696 aa22.92■■□□□ 1.26
RAB40C-204ENST00000538492 CTNSO60931 367 aa22.92■■□□□ 1.26
RAB40C-204ENST00000538492 SHC1P29353 583 aa22.92■■□□□ 1.26
RAB40C-204ENST00000538492 ZNF85Q03923 595 aa22.92■■□□□ 1.26
RAB40C-204ENST00000538492 LCN1P1Q5VSP4 162 aa22.92■■□□□ 1.26
RAB40C-204ENST00000538492 TRIQKQ629K1 86 aa22.92■■□□□ 1.26
RAB40C-204ENST00000538492 MZT2AQ6P582 158 aa22.92■■□□□ 1.26
RAB40C-204ENST00000538492 ARL14Q8N4G2 192 aa22.92■■□□□ 1.26
RAB40C-204ENST00000538492 RFLNBQ8N5W9 214 aa22.92■■□□□ 1.26
RAB40C-204ENST00000538492 LRRC17Q8N6Y2 441 aa22.92■■□□□ 1.26
RAB40C-204ENST00000538492 C17orf47Q8NEP4 570 aa22.92■■□□□ 1.26
RAB40C-204ENST00000538492 SDR9C7Q8NEX9 313 aa22.92■■□□□ 1.26
RAB40C-204ENST00000538492 OR52E2Q8NGJ4 325 aa22.92■■□□□ 1.26
RAB40C-204ENST00000538492 OR51L1Q8NGJ5 315 aa22.92■■□□□ 1.26
RAB40C-204ENST00000538492 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.92■■□□□ 1.26
RAB40C-204ENST00000538492 RPS6KB2Q9UBS0 482 aa22.92■■□□□ 1.26
RAB40C-204ENST00000538492 MRPS33Q9Y291 106 aaKnown RBP22.92■■□□□ 1.26
RAB40C-204ENST00000538492 SLC6A6P31641 620 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 ACVR1BP36896 505 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 KIR2DL3P43628 341 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 FGFBP1Q14512 234 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 SSX6Q7RTT6 188 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 LSMEM1Q8N8F7 131 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 OR5M3Q8NGP4 307 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 OR4C3Q8NH37 302 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 OR4K13Q8NH42 304 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 DEPDC7Q96QD5 511 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 OR10H1Q9Y4A9 318 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 TMEM131Q92545 1883 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 FAM25AB3EWG3 89 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 FAM25CB3EWG5 89 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 FAM25GB3EWG6 89 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 B4DXG7 233 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 IGLV3-19P01714 112 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 CT45A8P0DMV1 189 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 CT45A9P0DMV2 189 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 CT45A2Q5DJT8 189 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 GHDCQ8N2G8 530 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 C19orf18Q8NEA5 215 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 C16orf52Q8NHV5 167 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 CAPSLQ8WWF8 208 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 MMABQ96EY8 250 aaPredicted RBP22.91■■□□□ 1.26
RAB40C-204ENST00000538492 Q9N2J8 555 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 CLDN16Q9Y5I7 305 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 CLCA3PQ9Y6N3 262 aa22.91■■□□□ 1.26
RAB40C-204ENST00000538492 THADAQ6YHU6 1953 aa22.9■■□□□ 1.26
RAB40C-204ENST00000538492 HTR3EA5X5Y0 456 aa22.9■■□□□ 1.26
RAB40C-204ENST00000538492 GALP22466 123 aa22.9■■□□□ 1.26
RAB40C-204ENST00000538492 RBM34P42696 430 aaKnown RBP22.9■■□□□ 1.26
RAB40C-204ENST00000538492 FAAH2Q6GMR7 532 aa22.9■■□□□ 1.26
RAB40C-204ENST00000538492 ULK3Q6PHR2 472 aa22.9■■□□□ 1.26
RAB40C-204ENST00000538492 IL20RBQ6UXL0 311 aa22.9■■□□□ 1.26
RAB40C-204ENST00000538492 FAM98AQ8NCA5 519 aaKnown RBP22.9■■□□□ 1.26
RAB40C-204ENST00000538492 ORAI3Q9BRQ5 295 aa22.9■■□□□ 1.26
RAB40C-204ENST00000538492 INPP5EQ9NRR6 644 aa22.9■■□□□ 1.26
RAB40C-204ENST00000538492 MAGEB4O15481 346 aaPredicted RBP22.9■■□□□ 1.26
RAB40C-204ENST00000538492 GXYLT1Q4G148 440 aa22.9■■□□□ 1.26
RAB40C-204ENST00000538492 GLCCI1Q86VQ1 547 aa22.9■■□□□ 1.26
RAB40C-204ENST00000538492 DTX3Q8N9I9 347 aa22.9■■□□□ 1.26
RAB40C-204ENST00000538492 OR5J2Q8NH18 312 aa22.9■■□□□ 1.26
RAB40C-204ENST00000538492 ENKURQ8TC29 256 aa22.9■■□□□ 1.26
RAB40C-204ENST00000538492 TP53INP1Q96A56 240 aa22.9■■□□□ 1.26
RAB40C-204ENST00000538492 ZMYND19Q96E35 227 aaPredicted RBP22.9■■□□□ 1.26
RAB40C-204ENST00000538492 ERVMER34-1Q9H9K5 563 aa22.9■■□□□ 1.26
RAB40C-204ENST00000538492 CLDN4O14493 209 aa22.89■■□□□ 1.25
RAB40C-204ENST00000538492 SRPX2O60687 465 aaPredicted RBP22.89■■□□□ 1.25
RAB40C-204ENST00000538492 PRAMEF2O60811 474 aa22.89■■□□□ 1.25
RAB40C-204ENST00000538492 IFNA16P05015 189 aa22.89■■□□□ 1.25
RAB40C-204ENST00000538492 HIST1H1CP16403 213 aaKnown RBP22.89■■□□□ 1.25
RAB40C-204ENST00000538492 ELK1P19419 428 aa22.89■■□□□ 1.25
RAB40C-204ENST00000538492 GPR3P46089 330 aa22.89■■□□□ 1.25
RAB40C-204ENST00000538492 MTNR1BP49286 362 aa22.89■■□□□ 1.25
RAB40C-204ENST00000538492 ARHGAP11AQ6P4F7 1023 aa22.89■■□□□ 1.25
RAB40C-204ENST00000538492 ZNF595Q8IYB9 648 aa22.89■■□□□ 1.25
RAB40C-204ENST00000538492 SCAIQ8N9R8 606 aa22.89■■□□□ 1.25
RAB40C-204ENST00000538492 ZNF486Q96H40 463 aaPredicted RBP22.89■■□□□ 1.25
RAB40C-204ENST00000538492 AHCYL2Q96HN2 611 aaKnown RBP22.89■■□□□ 1.25
RAB40C-204ENST00000538492 ADAM18Q9Y3Q7 739 aa22.89■■□□□ 1.25
RAB40C-204ENST00000538492 TMEM184BQ9Y519 407 aaPredicted RBP22.89■■□□□ 1.25
RAB40C-204ENST00000538492 SOX30O94993 753 aa22.89■■□□□ 1.25
RAB40C-204ENST00000538492 CSTAP01040 98 aa22.89■■□□□ 1.25
RAB40C-204ENST00000538492 PYCR1P32322 319 aa22.89■■□□□ 1.25
RAB40C-204ENST00000538492 OR10A3P58181 314 aa22.89■■□□□ 1.25
RAB40C-204ENST00000538492 ZNF141Q15928 474 aa22.89■■□□□ 1.25
RAB40C-204ENST00000538492 LINC00114Q6XXX2 140 aa22.89■■□□□ 1.25
RAB40C-204ENST00000538492 VASH1Q7L8A9 365 aaPredicted RBP22.89■■□□□ 1.25
RAB40C-204ENST00000538492 ZNF550Q7Z398 422 aa22.89■■□□□ 1.25
RAB40C-204ENST00000538492 RDH10Q8IZV5 341 aa22.89■■□□□ 1.25
RAB40C-204ENST00000538492 BCORP1Q8N888 145 aa22.89■■□□□ 1.25
RAB40C-204ENST00000538492 DMRTB1Q96MA1 342 aa22.89■■□□□ 1.25
RAB40C-204ENST00000538492 SMAD5Q99717 465 aaKnown RBP22.89■■□□□ 1.25
RAB40C-204ENST00000538492 CTRCQ99895 268 aa22.89■■□□□ 1.25
RAB40C-204ENST00000538492 OR10A5Q9H207 317 aa22.89■■□□□ 1.25
RAB40C-204ENST00000538492 TMEM165Q9HC07 324 aa22.89■■□□□ 1.25
RAB40C-204ENST00000538492 DDX28Q9NUL7 540 aaKnown RBP22.89■■□□□ 1.25
RAB40C-204ENST00000538492 BAIAP2Q9UQB8 552 aa22.89■■□□□ 1.25
RAB40C-204ENST00000538492 TTC36A6NLP5 189 aa22.88■■□□□ 1.25
RAB40C-204ENST00000538492 MCIDASD6RGH6 385 aa22.88■■□□□ 1.25
RAB40C-204ENST00000538492 NPIPB9F8W1W9 429 aa22.88■■□□□ 1.25
RAB40C-204ENST00000538492 PLPP2O43688 288 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms