RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 WIF1Q9Y5W5 379 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 UNC13CQ8NB66 2214 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 ARHGEF17Q96PE2 2063 aaPredicted RBP3.28□□□□□ -1.88
PTPN22-211ENST00000538253 LOC100653049A0A140TA62 436 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 SERINC4A6NH21 518 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 UBFD1O14562 309 aaKnown RBP3.28□□□□□ -1.88
PTPN22-211ENST00000538253 DVL2O14641 736 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 ITM2AO43736 263 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 SH3BGRLO75368 114 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 GPX5O75715 221 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 KRT34O76011 436 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 AHSA1O95433 338 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 NUDT14O95848 222 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 CSTAP01040 98 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 HIST1H2ABP04908 130 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 ARAFP10398 606 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 PF4V1P10720 104 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 COX4I1P13073 169 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 PRG2P13727 222 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 IL7RP16871 459 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 CDH2P19022 906 aaPredicted RBP3.28□□□□□ -1.88
PTPN22-211ENST00000538253 GDF1P27539 372 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 PCGF2P35227 344 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 MC3RP41968 323 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 GUCA1AP43080 201 aaPredicted RBP3.28□□□□□ -1.88
PTPN22-211ENST00000538253 RIDAP52758 137 aaKnown RBP3.28□□□□□ -1.88
PTPN22-211ENST00000538253 RAE1P78406 368 aaKnown RBP3.28□□□□□ -1.88
PTPN22-211ENST00000538253 BTG2P78543 158 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 CDK6Q00534 326 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 GALK2Q01415 458 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 LASP1Q14847 261 aaKnown RBP3.28□□□□□ -1.88
PTPN22-211ENST00000538253 RNPS1Q15287 305 aaKnown RBP3.28□□□□□ -1.88
PTPN22-211ENST00000538253 ZMYND11Q15326 602 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 SPANXN4Q5MJ08 99 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 FAM182AQ5T1J6 154 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 GPR139Q6DWJ6 353 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 WBP2NLQ6ICG8 309 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 HMBOX1Q6NT76 420 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 SLC25A24Q6NUK1 477 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 RPL13AP3Q6NVV1 102 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 C19orf48Q6RUI8 117 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 TMEM107Q6UX40 140 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 IL20RBQ6UXL0 311 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 UNQ6126/PRO20091Q6UXV3 157 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 HIST3H2AQ7L7L0 130 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 FJX1Q86VR8 437 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 TPRA1Q86W33 373 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 IFNEQ86WN2 208 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 ARMC8Q8IUR7 673 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 PGAM4Q8N0Y7 254 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF615Q8N8J6 731 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 SLC38A9Q8NBW4 561 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 FDCSPQ8NFU4 85 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 OR5W2Q8NH69 310 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 OR14L1PQ8NHC6 308 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 PIGXQ8TBF5 258 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 CPT1CQ8TCG5 803 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 STK35Q8TDR2 534 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 GTF3AQ92664 365 aaKnown RBP3.28□□□□□ -1.88
PTPN22-211ENST00000538253 HOXB13Q92826 284 aaPredicted RBP3.28□□□□□ -1.88
PTPN22-211ENST00000538253 EXTL1Q92935 676 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 HIST1H2ACQ93077 130 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 CNRIP1Q96F85 164 aaPredicted RBP3.28□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF486Q96H40 463 aaPredicted RBP3.28□□□□□ -1.88
PTPN22-211ENST00000538253 GPR137Q96N19 417 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 ZNF317Q96PQ6 595 aaPredicted RBP3.28□□□□□ -1.88
PTPN22-211ENST00000538253 ITPAQ9BY32 194 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 TAS2R10Q9NYW0 307 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 TP53TG5Q9Y2B4 290 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 PCDHGB1Q9Y5G3 927 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 CORINQ9Y5Q5 1042 aa3.28□□□□□ -1.88
PTPN22-211ENST00000538253 ZFC3H1O60293 1989 aaKnown RBP3.28□□□□□ -1.88
PTPN22-211ENST00000538253 A0A1W2PPW3 197 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 PGRMC2O15173 223 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF264O43296 627 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 SLC25A17O43808 307 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 PRAMEF4O60810 478 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 OR2J2O76002 312 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 OR7A10O76100 309 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 OR6A2O95222 327 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 LRATO95237 230 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 UTS2O95399 124 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 LAMP1P11279 417 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 CXCR1P25024 350 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ITPKBP27987 946 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 PCSK6P29122 969 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 SLC7A1P30825 629 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 OPRM1P35372 400 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 DCTP40126 519 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 RPS18P62269 152 aaKnown RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 SLC35A1P78382 337 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 FOXO1Q12778 655 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 MERTKQ12866 999 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 DUSP8Q13202 625 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF791Q3KP31 576 aaPredicted RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 HES5Q5TA89 166 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 RIPPLY2Q5TAB7 128 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 PRAMEF9Q5VWM5 478 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 PYHIN1Q6K0P9 492 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 LYPD8Q6UX82 237 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms