RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 ENPP1P22413 925 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 TEAD1P28347 426 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 PTGS2P35354 604 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 GDNFP39905 211 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 CCR9P51686 369 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 BLVRAP53004 296 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 AP3S2P59780 193 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 ACTA2P62736 377 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 ACTG2P63267 376 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 CDK5R1Q15078 307 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 AGERQ15109 404 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 LTB4RQ15722 352 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 MLF2Q15773 248 aaPredicted RBP11.24□□□□□ -0.61
CPSF7-218ENST00000537641 RNASE12Q5GAN4 147 aaKnown RBP11.24□□□□□ -0.61
CPSF7-218ENST00000537641 FAM111BQ6SJ93 734 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 SFTPA1Q8IWL2 248 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 SYS1Q8N2H4 156 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 ZNF619Q8N2I2 560 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 FTMTQ8N4E7 242 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 GALNT11Q8NCW6 608 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 OR2T35Q8NGX2 323 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 OR2T4Q8NH00 348 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 KAT2AQ92830 837 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 RBPMSQ93062 196 aaKnown RBP11.24□□□□□ -0.61
CPSF7-218ENST00000537641 PTP4A1Q93096 173 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 SMIM19Q96E16 107 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 ZFP3Q96NJ6 502 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 INSM2Q96T92 566 aaPredicted RBP11.24□□□□□ -0.61
CPSF7-218ENST00000537641 IFT27Q9BW83 186 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 GSDMCQ9BYG8 508 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 PRSS16Q9NQE7 514 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 TM7SF3Q9NS93 570 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 C14orf105Q9NVL8 296 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 MED9Q9NWA0 146 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 CLDND1Q9NY35 253 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 GDE1Q9NZC3 331 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 THAP10Q9P2Z0 257 aaPredicted RBP11.24□□□□□ -0.61
CPSF7-218ENST00000537641 APOBEC3BQ9UH17 382 aaKnown RBP11.24□□□□□ -0.61
CPSF7-218ENST00000537641 SIGLEC7Q9Y286 467 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 PCDHGA9Q9Y5G4 932 aaKnown RBP11.24□□□□□ -0.61
CPSF7-218ENST00000537641 TRPM6Q9BX84 2022 aa11.24□□□□□ -0.61
CPSF7-218ENST00000537641 A0A1W2PPL8 197 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 hCG_1807616A0A1W2PRN6 198 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 CDK2AP1O14519 115 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 PRICKLE3O43900 615 aaPredicted RBP11.23□□□□□ -0.61
CPSF7-218ENST00000537641 IFNGP01579 166 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 SYPP08247 313 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 MRPL3P09001 348 aaKnown RBP11.23□□□□□ -0.61
CPSF7-218ENST00000537641 ZP3P21754 424 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 FCARP24071 287 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 NDUFS1P28331 727 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 SSTR2P30874 369 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 ACVR1BP36896 505 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 GDI2P50395 445 aaKnown RBP11.23□□□□□ -0.61
CPSF7-218ENST00000537641 OR12D2P58182 307 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 CRYZQ08257 329 aaKnown RBP11.23□□□□□ -0.61
CPSF7-218ENST00000537641 SUZ12Q15022 739 aaKnown RBP11.23□□□□□ -0.61
CPSF7-218ENST00000537641 OR1Q1Q15612 314 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 AMZ1Q400G9 498 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 OLFML2AQ68BL7 652 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 FAAH2Q6GMR7 532 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 ARHGAP11AQ6P4F7 1023 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 WDR88Q6ZMY6 472 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 MTSS1LQ765P7 747 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 PRSS42Q7Z5A4 293 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 OR6V1Q8N148 313 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 LRRC25Q8N386 305 aaPredicted RBP11.23□□□□□ -0.61
CPSF7-218ENST00000537641 SPICQ8N5J4 248 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 OR5J2Q8NH18 312 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 PFN4Q8NHR9 129 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 GHSRQ92847 366 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 GAL3ST3Q96A11 431 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 MS4A3Q96HJ5 214 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 C10orf90Q96M02 699 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 TIMM29Q9BSF4 260 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 TMPRSS13Q9BYE2 586 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 ZNF350Q9GZX5 532 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 OR51V1Q9H2C8 321 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 PPA2Q9H2U2 334 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 LIN7BQ9HAP6 207 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 BRD7Q9NPI1 651 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 FBXL21Q9UKT6 434 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 FBXL3Q9UKT7 428 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 MED31Q9Y3C7 131 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 NUMA1Q14980 2115 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 A0A1W2PRG6 482 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 CIB4A0PJX0 185 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 PDCD5O14737 125 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 RNGTTO60942 597 aaKnown RBP11.23□□□□□ -0.61
CPSF7-218ENST00000537641 SCO1O75880 301 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 STATHP02808 62 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 CA3P07451 260 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 GIPP09681 153 aaPredicted RBP11.23□□□□□ -0.61
CPSF7-218ENST00000537641 ANKRD34CP0C6C1 535 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 CPN1P15169 458 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 HTR2AP28223 471 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 CMPK1P30085 196 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 SOX9P48436 509 aa11.23□□□□□ -0.61
CPSF7-218ENST00000537641 GBX2P52951 348 aaPredicted RBP11.23□□□□□ -0.61
CPSF7-218ENST00000537641 VSX2P58304 361 aaPredicted RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms