RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 CCL19Q99731 98 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 RMND5AQ9H871 391 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 SLC6A13Q9NSD5 602 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 INTS9Q9NV88 658 aaKnown RBP11.12□□□□□ -0.63
PRKDC-207ENST00000536483 THUMPD1Q9NXG2 353 aaKnown RBP11.12□□□□□ -0.63
PRKDC-207ENST00000536483 ELOVL5Q9NYP7 299 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 DSPPQ9NZW4 1301 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 GMNCA6NCL1 334 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 TRIM64A6NGJ6 449 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 TRIM64BA6NI03 449 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 KIAA1324LA8MWY0 1029 aaPredicted RBP11.11□□□□□ -0.63
PRKDC-207ENST00000536483 C9JVG2 144 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 EBAG9O00559 213 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 EIF1AYO14602 144 aaKnown RBP11.11□□□□□ -0.63
PRKDC-207ENST00000536483 SEC14L5O43304 696 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 H6PDO95479 791 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 FAM107AO95990 144 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 CSTAP01040 98 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 PABPC4LP0CB38 370 aaKnown RBP11.11□□□□□ -0.63
PRKDC-207ENST00000536483 POU2F1P14859 743 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 FPR1P21462 350 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 CRYGSP22914 178 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 FKBP2P26885 142 aaKnown RBP11.11□□□□□ -0.63
PRKDC-207ENST00000536483 CCKARP32238 428 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 UGT2B10P36537 528 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 EIF1AXP47813 144 aaKnown RBP11.11□□□□□ -0.63
PRKDC-207ENST00000536483 SLC6A8P48029 635 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 KCNJ5P48544 419 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 CHRNEQ04844 493 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 FOXF1Q12946 379 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 SELENBP1Q13228 472 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 QPRTQ15274 297 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 SGCBQ16585 318 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 GTF2IRD2BQ6EKJ0 949 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 BLOC1S3Q6QNY0 202 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 PRSS57Q6UWY2 283 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 GTF2IRD2Q86UP8 949 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 FUNDC1Q8IVP5 155 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 OR6K3Q8NGY3 331 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 TMEM234Q8WY98 164 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 OSTF1Q92882 214 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 ZC3HAV1LQ96H79 300 aaKnown RBP11.11□□□□□ -0.63
PRKDC-207ENST00000536483 HS3ST6Q96QI5 342 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 TPT1P8Q9HAU6 139 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 TIGARQ9NQ88 270 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.11□□□□□ -0.63
PRKDC-207ENST00000536483 ACER3Q9NUN7 267 aa11.11□□□□□ -0.63
PRKDC-207ENST00000536483 MCTS1Q9ULC4 181 aaKnown RBP11.11□□□□□ -0.63
PRKDC-207ENST00000536483 ROS1P08922 2347 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 HIVEP2P31629 2446 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 C16orf97H3BN30 126 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 CXCL13O43927 109 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 GMFGO60234 142 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 GSNP06396 782 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 CHRM4P08173 479 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 TFPTP0C1Z6 253 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 PGCP20142 388 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 SHC1P29353 583 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 APOBEC1P41238 236 aaKnown RBP11.1□□□□□ -0.63
PRKDC-207ENST00000536483 CLK1P49759 484 aaKnown RBP11.1□□□□□ -0.63
PRKDC-207ENST00000536483 MAP2K6P52564 334 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 CASP9P55211 416 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 CARD18P57730 90 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 SESN3P58005 492 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 RAC3P60763 192 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 SYPL1Q16563 259 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 ZSWIM7Q19AV6 140 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 COX20Q5RI15 118 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 LRIF1Q5T3J3 769 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 PRAMEF8Q5VWM4 474 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 PRAMEF7Q5VXH5 474 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 ANKRD34AQ69YU3 496 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 HBMQ6B0K9 141 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 C22orf34Q6ZV56 151 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 ANKFN1Q8N957 763 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 ZNF610Q8N9Z0 462 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 OR9I1Q8NGQ6 314 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 RNF128Q8TEB7 428 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 CPNE4Q96A23 557 aaPredicted RBP11.1□□□□□ -0.63
PRKDC-207ENST00000536483 MDFIQ99750 246 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 EBF4Q9BQW3 602 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 SIKE1Q9BRV8 207 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 SLC39A3Q9BRY0 314 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 BDH2Q9BUT1 245 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 THUMPD3Q9BV44 507 aaKnown RBP11.1□□□□□ -0.63
PRKDC-207ENST00000536483 PAIP1Q9H074 479 aaKnown RBP11.1□□□□□ -0.63
PRKDC-207ENST00000536483 COQ10BQ9H8M1 238 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 CALML5Q9NZT1 146 aa11.1□□□□□ -0.63
PRKDC-207ENST00000536483 A0A096LPI6 279 aa11.09□□□□□ -0.63
PRKDC-207ENST00000536483 NDUFAB1O14561 156 aa11.09□□□□□ -0.63
PRKDC-207ENST00000536483 TNFSF11O14788 317 aa11.09□□□□□ -0.63
PRKDC-207ENST00000536483 SYNGR4O95473 234 aa11.09□□□□□ -0.63
PRKDC-207ENST00000536483 NUDT14O95848 222 aa11.09□□□□□ -0.63
PRKDC-207ENST00000536483 LOXP28300 417 aaPredicted RBP11.09□□□□□ -0.63
PRKDC-207ENST00000536483 AQP5P55064 265 aa11.09□□□□□ -0.63
PRKDC-207ENST00000536483 FADDQ13158 208 aa11.09□□□□□ -0.63
PRKDC-207ENST00000536483 RNPS1Q15287 305 aaKnown RBP11.09□□□□□ -0.63
PRKDC-207ENST00000536483 ZNF239Q16600 458 aaKnown RBP11.09□□□□□ -0.63
PRKDC-207ENST00000536483 NDUFAF6Q330K2 333 aa11.09□□□□□ -0.63
PRKDC-207ENST00000536483 TMEM176BQ3YBM2 270 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms