RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 CHRNEQ04844 493 aa10.59□□□□□ -0.71
KNTC1-208ENST00000535410 RASGEF1BQ0VAM2 473 aa10.59□□□□□ -0.71
KNTC1-208ENST00000535410 SYT14P1Q58G82 188 aa10.59□□□□□ -0.71
KNTC1-208ENST00000535410 STAC2Q6ZMT1 411 aa10.59□□□□□ -0.71
KNTC1-208ENST00000535410 FRRS1Q6ZNA5 592 aa10.59□□□□□ -0.71
KNTC1-208ENST00000535410 C20orf204Q6ZNR8 217 aa10.59□□□□□ -0.71
KNTC1-208ENST00000535410 TMPPEQ6ZT21 453 aa10.59□□□□□ -0.71
KNTC1-208ENST00000535410 PLEKHM3Q6ZWE6 761 aa10.59□□□□□ -0.71
KNTC1-208ENST00000535410 TUSC5Q8IXB3 177 aa10.59□□□□□ -0.71
KNTC1-208ENST00000535410 FAM71CQ8NEG0 241 aa10.59□□□□□ -0.71
KNTC1-208ENST00000535410 ABHD3Q8WU67 409 aa10.59□□□□□ -0.71
KNTC1-208ENST00000535410 DYDC1Q8WWB3 177 aa10.59□□□□□ -0.71
KNTC1-208ENST00000535410 HSD17B8Q92506 261 aa10.59□□□□□ -0.71
KNTC1-208ENST00000535410 ZC3HAV1LQ96H79 300 aaKnown RBP10.59□□□□□ -0.71
KNTC1-208ENST00000535410 PIP5K1AQ99755 562 aa10.59□□□□□ -0.71
KNTC1-208ENST00000535410 ACTR6Q9GZN1 396 aa10.59□□□□□ -0.71
KNTC1-208ENST00000535410 OCEL1Q9H607 264 aa10.59□□□□□ -0.71
KNTC1-208ENST00000535410 C12orf49Q9H741 205 aa10.59□□□□□ -0.71
KNTC1-208ENST00000535410 BCO1Q9HAY6 547 aa10.59□□□□□ -0.71
KNTC1-208ENST00000535410 C6orf203Q9P0P8 240 aaPredicted RBP10.59□□□□□ -0.71
KNTC1-208ENST00000535410 TRAPPC4Q9Y296 219 aa10.59□□□□□ -0.71
KNTC1-208ENST00000535410 USH1CQ9Y6N9 552 aa10.59□□□□□ -0.71
KNTC1-208ENST00000535410 CSMD2Q7Z408 3487 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 ZNF724A8MTY0 619 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 DEFB108AA8MXU0 73 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 FAAHO00519 579 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 GPR171O14626 319 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 POLR3GO15318 223 aaPredicted RBP10.58□□□□□ -0.72
KNTC1-208ENST00000535410 EIF1BO60739 113 aaKnown RBP10.58□□□□□ -0.72
KNTC1-208ENST00000535410 TMCC2O75069 709 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 PMS2P2O95744 297 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 GSNP06396 782 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 FESP07332 822 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 SHC1P29353 583 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 IL12AP29459 219 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 IDH2P48735 452 aaKnown RBP10.58□□□□□ -0.72
KNTC1-208ENST00000535410 DIO1P49895 249 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 CRISP3P54108 245 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 COPZ1P61923 177 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 LARS2Q15031 903 aaKnown RBP10.58□□□□□ -0.72
KNTC1-208ENST00000535410 PDK3Q15120 406 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 MAPK14Q16539 360 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 SYPL1Q16563 259 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 ACKR1Q16570 336 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 C6orf10Q5SRN2 563 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 SHEQ5VZ18 495 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 ANKRD34AQ69YU3 496 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 EPGNQ6UW88 154 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 HDXQ7Z353 690 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 ZNF550Q7Z398 422 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 MTDHQ86UE4 582 aaKnown RBP10.58□□□□□ -0.72
KNTC1-208ENST00000535410 ANKFN1Q8N957 763 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 WDR60Q8WVS4 1066 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 KISS1RQ969F8 398 aaPredicted RBP10.58□□□□□ -0.72
KNTC1-208ENST00000535410 DDIT4LQ96D03 193 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 ATP6V1G3Q96LB4 118 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 KLHDC3Q9BQ90 382 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 INPP5KQ9BT40 448 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 CCDC106Q9BWC9 280 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 SRXN1Q9BYN0 137 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 COQ10BQ9H8M1 238 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 TMEM45AQ9NWC5 275 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 MAP1AP78559 2803 aaPredicted RBP10.58□□□□□ -0.72
KNTC1-208ENST00000535410 MTORP42345 2549 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 PCNX3Q9H6A9 2034 aa10.58□□□□□ -0.72
KNTC1-208ENST00000535410 A0A0G2JPF8 293 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 A0A1W2PNR3 127 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 CFAP73A6NFT4 308 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 HMGB1P1B2RPK0 211 aaPredicted RBP10.57□□□□□ -0.72
KNTC1-208ENST00000535410 HNRNPCL2B2RXH8 293 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 HNRNPCL3B7ZW38 293 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 ZNF208O43345 1280 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 CYTIPO60759 359 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 HNRNPCL1O60812 293 aaKnown RBP10.57□□□□□ -0.72
KNTC1-208ENST00000535410 SMPD2O60906 423 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 HNRNPCL4P0DMR1 293 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 NID1P14543 1247 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 CD53P19397 219 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 KLK2P20151 261 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 PPIBP23284 216 aaKnown RBP10.57□□□□□ -0.72
KNTC1-208ENST00000535410 SLC1A3P43003 542 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 POLR2HP52434 150 aaKnown RBP10.57□□□□□ -0.72
KNTC1-208ENST00000535410 ITGADQ13349 1161 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 SLC9B1Q4ZJI4 515 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 LIN52Q52LA3 116 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 SFRP5Q5T4F7 317 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 TFAP2EQ6VUC0 442 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 Q6ZT83 130 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 GALNT5Q7Z7M9 940 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 ZNF100Q8IYN0 542 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 GABRG1Q8N1C3 465 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 LRRC75A-AS1Q8N1F1 130 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 PIGXQ8TBF5 258 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 ZG16BQ96DA0 208 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 NAA11Q9BSU3 229 aaPredicted RBP10.57□□□□□ -0.72
KNTC1-208ENST00000535410 CCDC28BQ9BUN5 200 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 TMUB1Q9BVT8 246 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 QRSL1Q9H0R6 528 aaKnown RBP10.57□□□□□ -0.72
KNTC1-208ENST00000535410 SLC38A1Q9H2H9 487 aa10.57□□□□□ -0.72
KNTC1-208ENST00000535410 RABEP2Q9H5N1 569 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms