RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 HTR5AP47898 357 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 TM4SF4P48230 202 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 CAMK2DQ13557 499 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 SBSNQ6UWP8 590 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 FAM57BQ71RH2 274 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 MEPCEQ7L2J0 689 aaKnown RBP16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 S100A7AQ86SG5 101 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 PSMF1Q92530 271 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 HIF1ANQ9NWT6 349 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 IVDP26440 423 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 MAT1AQ00266 395 aaKnown RBP16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 PRDX1Q06830 199 aaKnown RBP16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 TMEM176BQ3YBM2 270 aaPredicted RBP16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 PODNL1Q6PEZ8 512 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 B3GNT7Q8NFL0 401 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 ASB17Q8WXJ9 295 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 TREX1Q9NSU2 369 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 V9GY05 133 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 GPX3P22352 226 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 SERPINA12Q8IW75 414 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 ASB11Q8WXH4 323 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 SLC30A3Q99726 388 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 TWSG1Q9GZX9 223 aa16.99■□□□□ 0.31
SFSWAP-203ENST00000535236 PTTG1O95997 202 aa16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 HOXD9P28356 352 aaPredicted RBP16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 KCNJ10P78508 379 aa16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 SPOCK1Q08629 439 aa16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 ELP2Q6IA86 826 aa16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 ZFAND1Q8TCF1 268 aa16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 WDR83Q9BRX9 315 aaKnown RBP16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 TMEM181Q9P2C4 612 aa16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 ARPC5O15511 151 aa16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 HTD2P86397 168 aa16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 OR2T35Q8NGX2 323 aa16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 PTPN6P29350 595 aa16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 DCDP81605 110 aaKnown RBP16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 FAM69AQ5T7M9 428 aa16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 ZFAND2BQ8WV99 257 aa16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 ARL11Q969Q4 196 aa16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 NT5C3BQ969T7 300 aa16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 OR6C1Q96RD1 312 aa16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 INPP5EQ9NRR6 644 aa16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 ONECUT3O60422 494 aaPredicted RBP16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 GJA5P36382 358 aa16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 IDH3GP51553 393 aaPredicted RBP16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 GK2Q14410 553 aaPredicted RBP16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 PGGHGQ32M88 737 aa16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 PTCRAQ6ISU1 281 aaPredicted RBP16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 LCN10Q6JVE6 187 aa16.98■□□□□ 0.31
SFSWAP-203ENST00000535236 ZNF264O43296 627 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 STK17BO94768 372 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 S100A7P31151 101 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 HYAL4Q2M3T9 481 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 CTSL3PQ5NE16 218 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 TSSK4Q6SA08 328 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 FAM83HQ6ZRV2 1179 aaPredicted RBP16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 ADIPOR2Q86V24 386 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 TMEM163Q8TC26 289 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 ARRDC3Q96B67 414 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 SORCS2Q96PQ0 1159 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 ELOVL3Q9HB03 270 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 PCDHGA1Q9Y5H4 931 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 AIFM1O95831 613 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 IFNA17P01571 189 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 ZNF808Q8N4W9 903 aaPredicted RBP16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 NDNFQ8TB73 568 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 CNTNAP3BQ96NU0 1288 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 METTL9Q9H1A3 318 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 CSNK1G1Q9HCP0 422 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 HIDE1A8MVS5 230 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 ARNTLO00327 626 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 TIMM8AO60220 97 aaPredicted RBP16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 SSX4O60224 188 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 PRAF2O60831 178 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 SPDEFO95238 335 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 OR7E24Q6IFN5 339 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 LHX3Q9UBR4 397 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 C17orf113A0A1B0GUU1 675 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 ARPC1BO15143 372 aaKnown RBP16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 SUSD5O60279 629 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 SEC14L2O76054 403 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 CST5P28325 142 aaPredicted RBP16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 MGAT3Q09327 533 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 AAED1Q7RTV5 226 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 OR4N2Q8NGD1 307 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 FER1L6-AS2Q96M78 137 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 C19orf12Q9NSK7 152 aa16.97■□□□□ 0.31
SFSWAP-203ENST00000535236 CA5AP35218 305 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 CLDN17P56750 224 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 MPEG1Q2M385 716 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 FRZBQ92765 325 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 ANKRD60Q9BZ19 345 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 PRELID1Q9Y255 219 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 NOSIPQ9Y314 301 aaKnown RBP16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 FBXO7Q9Y3I1 522 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 TMEM184BQ9Y519 407 aaPredicted RBP16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 ZNF142P52746 1687 aaPredicted RBP16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 SETD1AO15047 1707 aaKnown RBP16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 A0A1W2PPV4 95 aa16.96■□□□□ 0.31
SFSWAP-203ENST00000535236 F8W036 122 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms