RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 PLEKHG7Q6ZR37 379 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 WDR53Q7Z5U6 358 aaPredicted RBP8.91□□□□□ -0.98
CHKA-207ENST00000533728 CCDC190Q86UF4 302 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 LAPTM4BQ86VI4 370 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 ZNF485Q8NCK3 441 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 OR52R1Q8NGF1 315 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 OR9A4Q8NGU2 314 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 C1orf216Q8TAB5 229 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 RIT1Q92963 219 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 NXPE2Q96DL1 559 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 ITPKCQ96DU7 683 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 ZDHHC12Q96GR4 267 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 DGAT2Q96PD7 388 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 SLC38A3Q99624 504 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 ASPNQ9BXN1 380 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 HOXD1Q9GZZ0 328 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 NUAK2Q9H093 628 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 OR52D1Q9H346 318 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 UBQLN3Q9H347 655 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 CPNE5Q9HCH3 593 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 Q9N2J8 555 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 PDE7BQ9NP56 450 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 CTPS2Q9NRF8 586 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 TMEM74BQ9NUR3 256 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 ASB6Q9NWX5 421 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 SIDT1Q9NXL6 827 aaKnown RBP8.91□□□□□ -0.98
CHKA-207ENST00000533728 TAS2R16Q9NYV7 291 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 CNIH4Q9P003 139 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 H2AFY2Q9P0M6 372 aaPredicted RBP8.91□□□□□ -0.98
CHKA-207ENST00000533728 CLEC2DQ9UHP7 191 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 DOLKQ9UPQ8 538 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 CSNK1G3Q9Y6M4 447 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 MPDZO75970 2070 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 EXPH5Q8NEV8 1989 aa8.91□□□□□ -0.98
CHKA-207ENST00000533728 APCP25054 2843 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 TRDV1A0A1B0GX56 115 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 GXYLT2A0PJZ3 443 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 J3QRE1 110 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 BHLHE40O14503 412 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 AQP9O43315 295 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 AKAP8O43823 692 aaKnown RBP8.9□□□□□ -0.98
CHKA-207ENST00000533728 PTP4A3O75365 173 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 TSPAN19P0C672 248 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 LIMS3P0CW19 117 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 LIMS4P0CW20 117 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 GABRA5P31644 462 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 ETV5P41161 510 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 MLLT3P42568 568 aaPredicted RBP8.9□□□□□ -0.98
CHKA-207ENST00000533728 GPR4P46093 362 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 GCGRP47871 477 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 SLC9A3P48764 834 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 DHPSP49366 369 aaPredicted RBP8.9□□□□□ -0.98
CHKA-207ENST00000533728 ETV1P50549 477 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 GPR143P51810 404 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 ATP12AP54707 1039 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 MAZP56270 477 aaKnown RBP8.9□□□□□ -0.98
CHKA-207ENST00000533728 NXPH1P58417 271 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 PPP1CAP62136 330 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 PSPHP78330 225 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 LSM11P83369 360 aaKnown RBP eCLIP8.9□□□□□ -0.981e-6■□□□□ 10.6
CHKA-207ENST00000533728 SLC13A2Q13183 592 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 TRAM1Q15629 374 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 ISXQ2M1V0 245 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 FLYWCH1Q4VC44 716 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 ZNF542PQ5EBM4 170 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 SPANXN2Q5MJ10 180 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 CCNJQ5T5M9 372 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 ARHGAP40Q5TG30 622 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 HSDL2Q6YN16 418 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 NUP54Q7Z3B4 507 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 HMGN2P46Q86SG4 172 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 KMT5CQ86Y97 462 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 SLITRK4Q8IW52 837 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 SPACA3Q8IXA5 215 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 KLHL36Q8N4N3 616 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 FRMD1Q8N878 549 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 SIMC1Q8NDZ2 872 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 SNIP1Q8TAD8 396 aaKnown RBP8.9□□□□□ -0.98
CHKA-207ENST00000533728 TMEM255BQ8WV15 326 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 DNAJA4Q8WW22 397 aaPredicted RBP8.9□□□□□ -0.98
CHKA-207ENST00000533728 RLN3Q8WXF3 142 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 UFD1Q92890 307 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 OR1F2PQ96R84 312 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 MAP3K3Q99759 626 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 PRR14Q9BWN1 585 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 SLC19A3Q9BZV2 496 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 ERVMER34-1Q9H9K5 563 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 DNAJB12Q9NXW2 375 aaKnown RBP8.9□□□□□ -0.98
CHKA-207ENST00000533728 HAO2Q9NYQ3 351 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 DAPK2Q9UIK4 370 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 ICAM5Q9UMF0 924 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 SLC35A3Q9Y2D2 325 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 GSTK1Q9Y2Q3 226 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 CAB39Q9Y376 341 aaPredicted RBP8.9□□□□□ -0.98
CHKA-207ENST00000533728 SF3B6Q9Y3B4 125 aaKnown RBP8.9□□□□□ -0.98
CHKA-207ENST00000533728 CLDN16Q9Y5I7 305 aa8.9□□□□□ -0.98
CHKA-207ENST00000533728 SPTBP11277 2137 aa8.9□□□□□ -0.99
CHKA-207ENST00000533728 A0A0A6YYC8 382 aaPredicted RBP8.89□□□□□ -0.99
CHKA-207ENST00000533728 CENPVL1A0A0U1RR11 272 aa8.89□□□□□ -0.99
CHKA-207ENST00000533728 FUOMA2VDF0 154 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms