RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 TMEM156Q8N614 296 aa16.89■□□□□ 0.29
SMPD1-208ENST00000533123 IQCF1Q8N6M8 205 aa16.89■□□□□ 0.29
SMPD1-208ENST00000533123 OR10G3Q8NGC4 313 aa16.89■□□□□ 0.29
SMPD1-208ENST00000533123 ASB15Q8WXK1 588 aa16.89■□□□□ 0.29
SMPD1-208ENST00000533123 SPACA9Q96E40 222 aaPredicted RBP16.89■□□□□ 0.29
SMPD1-208ENST00000533123 RTN4RQ9BZR6 473 aa16.89■□□□□ 0.29
SMPD1-208ENST00000533123 ANKRD19PQ9H560 264 aa16.89■□□□□ 0.29
SMPD1-208ENST00000533123 IMPAD1Q9NX62 359 aa16.89■□□□□ 0.29
SMPD1-208ENST00000533123 ANKRD10Q9NXR5 420 aa16.89■□□□□ 0.29
SMPD1-208ENST00000533123 ERVK-18Q9QC07 812 aa16.89■□□□□ 0.29
SMPD1-208ENST00000533123 FAM20BO75063 409 aa16.89■□□□□ 0.29
SMPD1-208ENST00000533123 RRADP55042 308 aa16.89■□□□□ 0.29
SMPD1-208ENST00000533123 CRTC2Q53ET0 693 aaPredicted RBP16.89■□□□□ 0.29
SMPD1-208ENST00000533123 ZNF468Q5VIY5 522 aaPredicted RBP16.89■□□□□ 0.29
SMPD1-208ENST00000533123 XAF1Q6GPH4 301 aa16.89■□□□□ 0.29
SMPD1-208ENST00000533123 GALNT16Q8N428 558 aa16.89■□□□□ 0.29
SMPD1-208ENST00000533123 ZNF527Q8NB42 609 aa16.89■□□□□ 0.29
SMPD1-208ENST00000533123 RHOXF1Q8NHV9 184 aa16.89■□□□□ 0.29
SMPD1-208ENST00000533123 ACOT11Q8WXI4 607 aaPredicted RBP16.89■□□□□ 0.29
SMPD1-208ENST00000533123 NODALQ96S42 347 aa16.89■□□□□ 0.29
SMPD1-208ENST00000533123 ARMC7Q9H6L4 198 aa16.89■□□□□ 0.29
SMPD1-208ENST00000533123 STMN3Q9NZ72 180 aa16.89■□□□□ 0.29
SMPD1-208ENST00000533123 DKK4Q9UBT3 224 aa16.89■□□□□ 0.29
SMPD1-208ENST00000533123 POLHQ9Y253 713 aa16.89■□□□□ 0.29
SMPD1-208ENST00000533123 ANKRD11Q6UB99 2663 aaPredicted RBP16.88■□□□□ 0.29
SMPD1-208ENST00000533123 TRAPPC13A5PLN9 417 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 SERINC4A6NH21 518 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 LCN1P31025 176 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 HOXD11P31277 338 aaPredicted RBP16.88■□□□□ 0.29
SMPD1-208ENST00000533123 OMPP47874 163 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 CXCR4P61073 352 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 EFR3AQ14156 821 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 FGFBP1Q14512 234 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 CD226Q15762 336 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 NTRK2Q16620 822 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 DEFB109BQ30KR1 87 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 ZNF791Q3KP31 576 aaPredicted RBP16.88■□□□□ 0.29
SMPD1-208ENST00000533123 OPN5Q6U736 354 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 KIF18BQ86Y91 864 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 NRMQ8IXM6 262 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 HGDQ93099 445 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 DCBLD2Q96PD2 775 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 PRSS27Q9BQR3 290 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 CCDC90BQ9GZT6 254 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 DSN1Q9H410 356 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 EGLN3Q9H6Z9 239 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 AMBNQ9NP70 447 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.88■□□□□ 0.29
SMPD1-208ENST00000533123 TESQ9UGI8 421 aaKnown RBP16.88■□□□□ 0.29
SMPD1-208ENST00000533123 LYPD3O95274 346 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 EVI2BP34910 448 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 EIF2S3P41091 472 aaKnown RBP16.88■□□□□ 0.29
SMPD1-208ENST00000533123 GPR4P46093 362 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 NUDT6P53370 316 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 CDC42P60953 191 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 SLC35A2P78381 396 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 CD300LDQ6UXZ3 194 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 RRM2BQ7LG56 351 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 NUP54Q7Z3B4 507 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 MARCH3Q86UD3 253 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 SPACA3Q8IXA5 215 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 DEPDC4Q8N2C3 294 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 POGLUT1Q8NBL1 392 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 GRHL3Q8TE85 626 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 PLA2G12AQ9BZM1 189 aa16.88■□□□□ 0.29
SMPD1-208ENST00000533123 FADS1O60427 444 aa16.87■□□□□ 0.29
SMPD1-208ENST00000533123 IMPDH2P12268 514 aa16.87■□□□□ 0.29
SMPD1-208ENST00000533123 ACAA2P42765 397 aaKnown RBP16.87■□□□□ 0.29
SMPD1-208ENST00000533123 RAB39AQ14964 217 aa16.87■□□□□ 0.29
SMPD1-208ENST00000533123 BICRALQ6AI39 1079 aa16.87■□□□□ 0.29
SMPD1-208ENST00000533123 GPR141Q7Z602 305 aa16.87■□□□□ 0.29
SMPD1-208ENST00000533123 P3H2Q8IVL5 708 aa16.87■□□□□ 0.29
SMPD1-208ENST00000533123 BEST3Q8N1M1 668 aa16.87■□□□□ 0.29
SMPD1-208ENST00000533123 ZNF540Q8NDQ6 660 aa16.87■□□□□ 0.29
SMPD1-208ENST00000533123 PIGXQ8TBF5 258 aa16.87■□□□□ 0.29
SMPD1-208ENST00000533123 PHOSPHO1Q8TCT1 267 aa16.87■□□□□ 0.29
SMPD1-208ENST00000533123 GNPDA2Q8TDQ7 276 aa16.87■□□□□ 0.29
SMPD1-208ENST00000533123 TMCO6Q96DC7 493 aa16.87■□□□□ 0.29
SMPD1-208ENST00000533123 TBL1XR1Q9BZK7 514 aa16.87■□□□□ 0.29
SMPD1-208ENST00000533123 DUSP21Q9H596 190 aa16.87■□□□□ 0.29
SMPD1-208ENST00000533123 SCN3BQ9NY72 215 aa16.87■□□□□ 0.29
SMPD1-208ENST00000533123 TEKT2Q9UIF3 430 aa16.87■□□□□ 0.29
SMPD1-208ENST00000533123 TPRKBQ9Y3C4 175 aa16.87■□□□□ 0.29
SMPD1-208ENST00000533123 C17orf51A8MQB3 221 aa16.86■□□□□ 0.29
SMPD1-208ENST00000533123 SCO2O43819 266 aa16.86■□□□□ 0.29
SMPD1-208ENST00000533123 F10P00742 488 aa16.86■□□□□ 0.29
SMPD1-208ENST00000533123 CSTAP01040 98 aa16.86■□□□□ 0.29
SMPD1-208ENST00000533123 ALDH6A1Q02252 535 aaKnown RBP16.86■□□□□ 0.29
SMPD1-208ENST00000533123 COX10Q12887 443 aa16.86■□□□□ 0.29
SMPD1-208ENST00000533123 MBOAT2Q6ZWT7 520 aa16.86■□□□□ 0.29
SMPD1-208ENST00000533123 AHSA2Q719I0 299 aa16.86■□□□□ 0.29
SMPD1-208ENST00000533123 GRAMD2AQ8IUY3 354 aa16.86■□□□□ 0.29
SMPD1-208ENST00000533123 IL4I1Q96RQ9 567 aa16.86■□□□□ 0.29
SMPD1-208ENST00000533123 ALG1L2C9J202 215 aa16.86■□□□□ 0.29
SMPD1-208ENST00000533123 FMO6PO60774 539 aa16.86■□□□□ 0.29
SMPD1-208ENST00000533123 IFNGR2P38484 337 aa16.86■□□□□ 0.29
SMPD1-208ENST00000533123 CCL11P51671 97 aa16.86■□□□□ 0.29
SMPD1-208ENST00000533123 FNDC7Q5VTL7 733 aa16.86■□□□□ 0.29
SMPD1-208ENST00000533123 SLX4IPQ5VYV7 408 aa16.86■□□□□ 0.29
SMPD1-208ENST00000533123 CCDC81Q6ZN84 652 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms