RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 RASSF2P50749 326 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 SUMO3P55854 103 aaPredicted RBP10.95□□□□□ -0.66
CAPN1-223ENST00000533079 RAC3P60763 192 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 FOXF1Q12946 379 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 SELENBP1Q13228 472 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 ZNF678Q5SXM1 525 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 C1QTNF12Q5T7M4 302 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 FRMD7Q6ZUT3 714 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 IKBIPQ70UQ0 350 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 MTDHQ86UE4 582 aaKnown RBP10.95□□□□□ -0.66
CAPN1-223ENST00000533079 CDRT4Q8N9R6 151 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 ZNF540Q8NDQ6 660 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 OR4C3Q8NH37 302 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 SGMS2Q8NHU3 365 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 GPR151Q8TDV0 419 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 HTRA1Q92743 480 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 AMDHD1Q96NU7 426 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 ZNF382Q96SR6 550 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 CCDC28BQ9BUN5 200 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 PRR14Q9BWN1 585 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 GLIPR2Q9H4G4 154 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 COQ10BQ9H8M1 238 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 MYNNQ9NPC7 610 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 MRGBPQ9NV56 204 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 PRSS50Q9UI38 385 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 ZNF225Q9UK10 706 aa10.95□□□□□ -0.66
CAPN1-223ENST00000533079 GPC6Q9Y625 555 aaPredicted RBP10.95□□□□□ -0.66
CAPN1-223ENST00000533079 A0A0A6YYJ9 748 aa10.94□□□□□ -0.66
CAPN1-223ENST00000533079 LOC390937A0A1W2PQ73 354 aa10.94□□□□□ -0.66
CAPN1-223ENST00000533079 GXYLT2A0PJZ3 443 aa10.94□□□□□ -0.66
CAPN1-223ENST00000533079 CFAP73A6NFT4 308 aa10.94□□□□□ -0.66
CAPN1-223ENST00000533079 PRPS2P11908 318 aa10.94□□□□□ -0.66
CAPN1-223ENST00000533079 ITGA2P17301 1181 aa10.94□□□□□ -0.66
CAPN1-223ENST00000533079 SHC1P29353 583 aa10.94□□□□□ -0.66
CAPN1-223ENST00000533079 SLC7A1P30825 629 aa10.94□□□□□ -0.66
CAPN1-223ENST00000533079 SPOCK1Q08629 439 aa10.94□□□□□ -0.66
CAPN1-223ENST00000533079 CR1LQ2VPA4 569 aa10.94□□□□□ -0.66
CAPN1-223ENST00000533079 UNC50Q53HI1 259 aa10.94□□□□□ -0.66
CAPN1-223ENST00000533079 B3GLCTQ6Y288 498 aa10.94□□□□□ -0.66
CAPN1-223ENST00000533079 ZNF433Q8N7K0 673 aaPredicted RBP10.94□□□□□ -0.66
CAPN1-223ENST00000533079 ZNF781Q8N8C0 355 aa10.94□□□□□ -0.66
CAPN1-223ENST00000533079 GATSQ8NAP1 163 aa10.94□□□□□ -0.66
CAPN1-223ENST00000533079 PIK3R3Q92569 461 aa10.94□□□□□ -0.66
CAPN1-223ENST00000533079 THOC1Q96FV9 657 aaKnown RBP10.94□□□□□ -0.66
CAPN1-223ENST00000533079 APIPQ96GX9 242 aa10.94□□□□□ -0.66
CAPN1-223ENST00000533079 SH3YL1Q96HL8 342 aaPredicted RBP10.94□□□□□ -0.66
CAPN1-223ENST00000533079 TMEM237Q96Q45 408 aa10.94□□□□□ -0.66
CAPN1-223ENST00000533079 GSTO2Q9H4Y5 243 aa10.94□□□□□ -0.66
CAPN1-223ENST00000533079 CXorf36Q9H7Y0 433 aa10.94□□□□□ -0.66
CAPN1-223ENST00000533079 FKRPQ9H9S5 495 aa10.94□□□□□ -0.66
CAPN1-223ENST00000533079 ZDHHC2Q9UIJ5 367 aa10.94□□□□□ -0.66
CAPN1-223ENST00000533079 SERTM1A2A2V5 107 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 TRPC5OSA6NMA1 111 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 PPP6CO00743 305 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 SMAD9O15198 467 aaKnown RBP10.93□□□□□ -0.66
CAPN1-223ENST00000533079 SLC22A2O15244 555 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 CYTIPO60759 359 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 TGFAP01135 160 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 CHRNGP07510 517 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 T-ENOLP0DO92 83 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 ZNF23P17027 643 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 HMOX2P30519 316 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 APOBEC3AP31941 199 aaPredicted RBP10.93□□□□□ -0.66
CAPN1-223ENST00000533079 PRIM2P49643 509 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 CDH13P55290 713 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 CLCQ05315 142 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 C2orf80Q0P641 193 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 RASGEF1BQ0VAM2 473 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 SF3A3Q12874 501 aaKnown RBP eCLIP10.93□□□□□ -0.664e-12■■■■□ 21.1
CAPN1-223ENST00000533079 OR7E24Q6IFN5 339 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 FAM71E1Q6IPT2 247 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 GPRIN3Q6ZVF9 776 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 RPS27LQ71UM5 84 aaKnown RBP10.93□□□□□ -0.66
CAPN1-223ENST00000533079 ASRGL1Q7L266 308 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 MAVSQ7Z434 540 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 GALNT5Q7Z7M9 940 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 ZNF100Q8IYN0 542 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 CCNYL1Q8N7R7 359 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 ZNF527Q8NB42 609 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 CEP70Q8NHQ1 597 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 ZNF764Q96H86 408 aaPredicted RBP10.93□□□□□ -0.66
CAPN1-223ENST00000533079 NSL1Q96IY1 281 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 MRGPRX4Q96LA9 322 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 MS4A4EQ96PG1 132 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 EBPLQ9BY08 206 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 EQTNQ9NQ60 294 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 EMC3Q9P0I2 261 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 ING1Q9UK53 422 aaPredicted RBP10.93□□□□□ -0.66
CAPN1-223ENST00000533079 SLC25A15Q9Y619 301 aa10.93□□□□□ -0.66
CAPN1-223ENST00000533079 RAD51DO75771 328 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 KCNK2O95069 426 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 ENO1P06733 434 aaKnown RBP10.92□□□□□ -0.66
CAPN1-223ENST00000533079 KITP10721 976 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 TSPAN8P19075 237 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 PCMT1P22061 227 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 ENPP1P22413 925 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 CALB2P22676 271 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 COMPP49747 757 aaPredicted RBP10.92□□□□□ -0.66
CAPN1-223ENST00000533079 ZNF83P51522 516 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 P2RX1P51575 399 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms