RNA–Protein interactions for RNA: ENST00000532446.5

PPP1CA-208, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 5

Gene PPP1CA, Length 1,465 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-208ENST00000532446 LINC00114Q6XXX2 140 aa16.29■□□□□ 0.2
PPP1CA-208ENST00000532446 WDR88Q6ZMY6 472 aa16.29■□□□□ 0.2
PPP1CA-208ENST00000532446 GRINAQ7Z429 371 aa16.29■□□□□ 0.2
PPP1CA-208ENST00000532446 NKAIN4Q8IVV8 208 aa16.29■□□□□ 0.2
PPP1CA-208ENST00000532446 FAM98AQ8NCA5 519 aaKnown RBP16.29■□□□□ 0.2
PPP1CA-208ENST00000532446 OR52J3Q8NH60 311 aa16.29■□□□□ 0.2
PPP1CA-208ENST00000532446 ZBTB8AQ96BR9 441 aa16.29■□□□□ 0.2
PPP1CA-208ENST00000532446 DTNBP1Q96EV8 351 aa16.29■□□□□ 0.2
PPP1CA-208ENST00000532446 MRGPRX4Q96LA9 322 aa16.29■□□□□ 0.2
PPP1CA-208ENST00000532446 C12orf10Q9HB07 376 aa16.29■□□□□ 0.2
PPP1CA-208ENST00000532446 SELENONQ9NZV5 590 aa16.29■□□□□ 0.2
PPP1CA-208ENST00000532446 B4GALT7Q9UBV7 327 aa16.29■□□□□ 0.2
PPP1CA-208ENST00000532446 DKKL1Q9UK85 242 aa16.29■□□□□ 0.2
PPP1CA-208ENST00000532446 B3GNT3Q9Y2A9 372 aa16.29■□□□□ 0.2
PPP1CA-208ENST00000532446 U3KQV3 271 aa16.29■□□□□ 0.2
PPP1CA-208ENST00000532446 A0A087WUJ7 227 aa16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 TRBV4-1A0A0J9YWV2 114 aa16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 C7orf72A4D263 438 aa16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 GDF1P27539 372 aa16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 TACR3P29371 465 aa16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 DNAJA1P31689 397 aaKnown RBP16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 HTR3AP46098 478 aa16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 PLGLB1Q02325 96 aa16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 SLC34A1Q06495 639 aa16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 FOXF1Q12946 379 aa16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 FOXD4Q12950 439 aaPredicted RBP16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 GK3PQ14409 553 aa16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 TMEM44Q2T9K0 475 aa16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 GLYR1Q49A26 553 aaPredicted RBP16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 FGD3Q5JSP0 725 aa16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 TMEM179BQ7Z7N9 219 aa16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 POC1BQ8TC44 478 aa16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 SLC7A13Q8TCU3 470 aa16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 MPP4Q96JB8 637 aa16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 ALPK1Q96QP1 1244 aa16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 ZNF426Q9BUY5 554 aa16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 MFRPQ9BY79 579 aa16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 OR2B2Q9GZK3 357 aa16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 ZNF71Q9NQZ8 489 aaPredicted RBP16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 OSGIN1Q9UJX0 560 aa16.28■□□□□ 0.2
PPP1CA-208ENST00000532446 E2F6O75461 281 aa16.27■□□□□ 0.19
PPP1CA-208ENST00000532446 PNMTP11086 282 aa16.27■□□□□ 0.19
PPP1CA-208ENST00000532446 HK1P19367 917 aa16.27■□□□□ 0.19
PPP1CA-208ENST00000532446 FPR1P21462 350 aa16.27■□□□□ 0.19
PPP1CA-208ENST00000532446 ADH6P28332 368 aa16.27■□□□□ 0.19
PPP1CA-208ENST00000532446 EIF1P41567 113 aaKnown RBP16.27■□□□□ 0.19
PPP1CA-208ENST00000532446 POLR2HP52434 150 aaKnown RBP16.27■□□□□ 0.19
PPP1CA-208ENST00000532446 PPIAP62937 165 aaKnown RBP16.27■□□□□ 0.19
PPP1CA-208ENST00000532446 FOXK1P85037 733 aa16.27■□□□□ 0.19
PPP1CA-208ENST00000532446 MERTKQ12866 999 aa16.27■□□□□ 0.19
PPP1CA-208ENST00000532446 EXOC3L2Q2M3D2 409 aa16.27■□□□□ 0.19
PPP1CA-208ENST00000532446 PLEKHN1Q494U1 663 aaPredicted RBP16.27■□□□□ 0.19
PPP1CA-208ENST00000532446 FBXW10Q5XX13 1052 aa16.27■□□□□ 0.19
PPP1CA-208ENST00000532446 RPUSD3Q6P087 351 aaKnown RBP16.27■□□□□ 0.19
PPP1CA-208ENST00000532446 SLC22A16Q86VW1 577 aa16.27■□□□□ 0.19
PPP1CA-208ENST00000532446 ADGRG3Q86Y34 549 aa16.27■□□□□ 0.19
PPP1CA-208ENST00000532446 GTPBP8Q8N3Z3 284 aaPredicted RBP16.27■□□□□ 0.19
PPP1CA-208ENST00000532446 TMEM251Q8N6I4 163 aa16.27■□□□□ 0.19
PPP1CA-208ENST00000532446 EXD3Q8N9H8 876 aa16.27■□□□□ 0.19
PPP1CA-208ENST00000532446 FAM83FQ8NEG4 500 aaPredicted RBP16.27■□□□□ 0.19
PPP1CA-208ENST00000532446 RNF217Q8TC41 542 aa16.27■□□□□ 0.19
PPP1CA-208ENST00000532446 TMEM255BQ8WV15 326 aa16.27■□□□□ 0.19
PPP1CA-208ENST00000532446 NRBF2Q96F24 287 aa16.27■□□□□ 0.19
PPP1CA-208ENST00000532446 QPCTLQ9NXS2 382 aa16.27■□□□□ 0.19
PPP1CA-208ENST00000532446 MED12Q93074 2177 aa16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 PIEZO2Q9H5I5 2752 aa16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 A0A087WUU8 490 aa16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 ELOA3DA6NLF2 546 aaPredicted RBP16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 FAM166BA8MTA8 275 aa16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 SHISA8B8ZZ34 492 aa16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 HPNP05981 417 aa16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 APOBEC1P41238 236 aaKnown RBP16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 PMP22Q01453 160 aa16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 TOMM20Q15388 145 aa16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 SEC23BQ15437 767 aa16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 ELOA3BQ3SY89 546 aa16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 RNFT1Q5M7Z0 435 aa16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 DCST1Q5T197 706 aa16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 SLC6A19Q695T7 634 aa16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 PODNL1Q6PEZ8 512 aa16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 SHQ1Q6PI26 577 aaKnown RBP16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 LSRQ86X29 649 aaPredicted RBP16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 ICA1LQ8NDH6 482 aa16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 ELOA3Q8NG57 546 aa16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 OR5K1Q8NHB7 308 aa16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 ACOT11Q8WXI4 607 aaPredicted RBP16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 BARD1Q99728 777 aaKnown RBP16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 TMCC3Q9ULS5 477 aa16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 OAZ3Q9UMX2 235 aa16.26■□□□□ 0.19
PPP1CA-208ENST00000532446 TMED7-TICAM2A0A0A6YYA0 188 aa16.25■□□□□ 0.19
PPP1CA-208ENST00000532446 SH3PXD2BA1X283 911 aa16.25■□□□□ 0.19
PPP1CA-208ENST00000532446 ACOT7O00154 380 aa16.25■□□□□ 0.19
PPP1CA-208ENST00000532446 CASQ2O14958 399 aaPredicted RBP16.25■□□□□ 0.19
PPP1CA-208ENST00000532446 TRAPPC6AO75865 159 aa16.25■□□□□ 0.19
PPP1CA-208ENST00000532446 RASAL1O95294 804 aa16.25■□□□□ 0.19
PPP1CA-208ENST00000532446 ZNF17P17021 662 aa16.25■□□□□ 0.19
PPP1CA-208ENST00000532446 TCEA1P23193 301 aaKnown RBP16.25■□□□□ 0.19
PPP1CA-208ENST00000532446 CXCR1P25024 350 aa16.25■□□□□ 0.19
PPP1CA-208ENST00000532446 RBM34P42696 430 aaKnown RBP16.25■□□□□ 0.19
PPP1CA-208ENST00000532446 MAGEA5P43359 124 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms