RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 CHMP24386 653 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 SLC7A1P30825 629 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 CCR4P51679 360 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 ALDH6A1Q02252 535 aaKnown RBP11.33□□□□□ -0.6
COPB1-208ENST00000532088 CCNIQ14094 377 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 GK3PQ14409 553 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 SLC10A1Q14973 349 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 QPRTQ15274 297 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 IQCCQ4KMZ1 466 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 NHSL2Q5HYW2 709 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 ZNF324BQ6AW86 544 aaPredicted RBP11.33□□□□□ -0.6
COPB1-208ENST00000532088 ULK3Q6PHR2 472 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 FAM180AQ6UWF9 173 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 CYP4Z1Q86W10 505 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 LACC1Q8IV20 430 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 SIAH3Q8IW03 269 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 FAM86B1Q8N7N1 296 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 ZNF563Q8TA94 476 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 DNAJA4Q8WW22 397 aaPredicted RBP11.33□□□□□ -0.6
COPB1-208ENST00000532088 RSRC1Q96IZ7 334 aaKnown RBP11.33□□□□□ -0.6
COPB1-208ENST00000532088 PRRC1Q96M27 445 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 ZNF300Q96RE9 604 aaPredicted RBP11.33□□□□□ -0.6
COPB1-208ENST00000532088 TAAR6Q96RI8 345 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 ZNF347Q96SE7 839 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 BARD1Q99728 777 aaKnown RBP11.33□□□□□ -0.6
COPB1-208ENST00000532088 PIGQQ9BRB3 760 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 AMBRA1Q9C0C7 1298 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 ADAM19Q9H013 955 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 ANKRD19PQ9H560 264 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 CCM2LQ9NUG4 571 aaPredicted RBP11.33□□□□□ -0.6
COPB1-208ENST00000532088 ARMC1Q9NVT9 282 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 USP24Q9UPU5 2620 aa11.33□□□□□ -0.6
COPB1-208ENST00000532088 NINQ8N4C6 2090 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 A0A0B4J2E0 115 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 A0A1B0GVC2 190 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 A0A1B0GX12 115 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 FRS3O43559 492 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 SUSD5O60279 629 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 PNMTP11086 282 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 GP1BBP13224 206 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 PRG2P13727 222 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 HK1P19367 917 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 HTR2AP28223 471 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 RYKP34925 604 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 GCKP35557 465 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 APOBEC1P41238 236 aaKnown RBP11.32□□□□□ -0.6
COPB1-208ENST00000532088 MAGEA5P43359 124 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 OR1E2P47887 323 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 IDH2P48735 452 aaKnown RBP11.32□□□□□ -0.6
COPB1-208ENST00000532088 POLR2HP52434 150 aaKnown RBP11.32□□□□□ -0.6
COPB1-208ENST00000532088 SESN3P58005 492 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 VLDLRP98155 873 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 LY6DQ14210 128 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 KPNB1Q14974 876 aaKnown RBP11.32□□□□□ -0.6
COPB1-208ENST00000532088 OR1Q1Q15612 314 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 KRTCAP3Q53RY4 240 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 ENTPD8Q5MY95 495 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 ZFP1Q6P2D0 407 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 ARSKQ6UWY0 536 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 ZDHHC21Q8IVQ6 265 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 OFCC1Q8IZS5 231 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 FAM83FQ8NEG4 500 aaPredicted RBP11.32□□□□□ -0.6
COPB1-208ENST00000532088 VANGL1Q8TAA9 524 aaPredicted RBP11.32□□□□□ -0.6
COPB1-208ENST00000532088 CANT1Q8WVQ1 401 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 MPP4Q96JB8 637 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 DHRS1Q96LJ7 313 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 WFDC6Q9BQY6 131 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 DENND2DQ9H6A0 471 aaPredicted RBP11.32□□□□□ -0.6
COPB1-208ENST00000532088 NDUFAF4Q9P032 175 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 STOML1Q9UBI4 398 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 RPS6KB2Q9UBS0 482 aa11.32□□□□□ -0.6
COPB1-208ENST00000532088 FAM32AQ9Y421 112 aaKnown RBP11.32□□□□□ -0.6
COPB1-208ENST00000532088 A0A1B0GWA3 101 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 TRAPPC13A5PLN9 417 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 FAM181BA6NEQ2 426 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 FAM166BA8MTA8 275 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 M0R082 166 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 EIF1AYO14602 144 aaKnown RBP11.31□□□□□ -0.6
COPB1-208ENST00000532088 CHP2O43745 196 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 PRSS23O95084 383 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 ACTL6AO96019 429 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 GHRHP01286 108 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 TNFRSF1BP20333 461 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 MST1P26927 711 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 CLK1P49759 484 aaKnown RBP11.31□□□□□ -0.6
COPB1-208ENST00000532088 GFRA1P56159 465 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 SMIM11AP58511 58 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 B3GALT5-AS1P59052 145 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 PMP22Q01453 160 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 ST3GAL3Q11203 375 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 FOXF1Q12946 379 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 SELENBP1Q13228 472 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 TOMM34Q15785 309 aaPredicted RBP11.31□□□□□ -0.6
COPB1-208ENST00000532088 BCL2A1Q16548 175 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 CMPK2Q5EBM0 449 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 AAGABQ6PD74 315 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 C5orf46Q6UWT4 87 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 DEF8Q6ZN54 512 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 PLEKHM3Q6ZWE6 761 aa11.31□□□□□ -0.6
COPB1-208ENST00000532088 TSEN54Q7Z6J9 526 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms