RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 SPOCK3Q9BQ16 436 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 CCDC106Q9BWC9 280 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 SFXN3Q9BWM7 321 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 RSPO3Q9BXY4 272 aaPredicted RBP11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 FAM107BQ9H098 131 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 NSRP1Q9H0G5 558 aaKnown RBP11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 ENKD1Q9H0I2 346 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 ARMC7Q9H6L4 198 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 NANOGQ9H9S0 305 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 RNF122Q9H9V4 155 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 CTPS2Q9NRF8 586 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 JKAMPQ9P055 326 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 CRYBG3Q68DQ2 2970 aa11.37□□□□□ -0.59
CCDC90B-216ENST00000529856 ADGRG4Q8IZF6 3080 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 SYT5O00445 386 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 HNRNPRO43390 633 aaKnown RBP11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 TNFSF13O75888 250 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 SYNGR4O95473 234 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 GKN3PP0CG01 181 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 FCGR2AP12318 317 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 IGFBP2P18065 325 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 SLC1A3P43003 542 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 HTR3AP46098 478 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 GZMMP51124 257 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 RBBP4Q09028 425 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 CYP51A1Q16850 503 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 FBXL19-AS1Q494R0 122 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 C3orf33Q6P1S2 294 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 ZNF550Q7Z398 422 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 NET1Q7Z628 596 aaPredicted RBP11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 SERPINA11Q86U17 422 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 ADGRG3Q86Y34 549 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 KRT73Q86Y46 540 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 C11orf65Q8NCR3 313 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 HIPK4Q8NE63 616 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 OR8J3Q8NGG0 315 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 OR10A6Q8NH74 314 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 SLC35B4Q969S0 331 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 SH3GL1Q99961 368 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 SLC39A3Q9BRY0 314 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 SPATA5L1Q9BVQ7 753 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 PRRG4Q9BZD6 226 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 COQ10BQ9H8M1 238 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 TIGARQ9NQ88 270 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 GID8Q9NWU2 228 aa11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 MCTS1Q9ULC4 181 aaKnown RBP11.36□□□□□ -0.59
CCDC90B-216ENST00000529856 CELSR2Q9HCU4 2923 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 A0A1W2PNR3 127 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 A0A1W2PNV4 684 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 CYSRT1A8MQ03 144 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 SERPINB7O75635 380 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 PRG2P13727 222 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 COX6B1P14854 86 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 UQCRBP14927 111 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 FKBP2P26885 142 aaKnown RBP11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 SLC7A1P30825 629 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 PRKAR1BP31321 381 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 KIR2DL2P43627 348 aaPredicted RBP11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 ASCL1P50553 236 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 GUSBP1Q15486 140 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 SYT14P1Q58G82 188 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 DHRS4L2Q6PKH6 230 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 CALHM3Q86XJ0 350 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 ZZZ3Q8IYH5 903 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 POU5F2Q8N7G0 328 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 SLC25A43Q8WUT9 341 aaPredicted RBP11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 RNASE6Q93091 150 aaKnown RBP11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 CPNE4Q96A23 557 aaPredicted RBP11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 MARVELD3Q96A59 401 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 STARD4Q96DR4 205 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 ZNF607Q96SK3 696 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 SRXN1Q9BYN0 137 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 ADAM19Q9H013 955 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 MYLK2Q9H1R3 596 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 PIGMQ9H3S5 423 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 CHRNA9Q9UGM1 479 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 OSGIN1Q9UJX0 560 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 ANGPT4Q9Y264 503 aa11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 SPIN1Q9Y657 262 aaPredicted RBP11.35□□□□□ -0.59
CCDC90B-216ENST00000529856 NBPF19A0A087WUL8 3843 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 TMED7-TICAM2A0A0A6YYA0 188 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 PRORSD1PA6NEY8 169 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 TPST1O60507 370 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 GCM2O75603 506 aaPredicted RBP11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 MFN2O95140 757 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 COX4I1P13073 169 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 TACR3P29371 465 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 AQP1P29972 269 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 CLK1P49759 484 aaKnown RBP11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 POLR2HP52434 150 aaKnown RBP11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 PCBP3P57721 371 aaKnown RBP11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 RAC3P60763 192 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 COPZ1P61923 177 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 ZNF239Q16600 458 aaKnown RBP11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 VMACQ2NL98 169 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 RABL3Q5HYI8 236 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 GTF2IRD2BQ6EKJ0 949 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 WBP2NLQ6ICG8 309 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 PPP4R4Q6NUP7 873 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 MEX3BQ6ZN04 569 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms