RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 KIRREL3Q8IZU9 778 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 SLC34A3Q8N130 599 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 OR4E2Q8NGC2 313 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 OR4K2Q8NGD2 314 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 OR2Y1Q8NGV0 311 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 VANGL1Q8TAA9 524 aaPredicted RBP4.09□□□□□ -1.75
CSDE1-212ENST00000529046 SSC4DQ8WTU2 575 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 LCN9Q8WX39 176 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 DCUN1D1Q96GG9 259 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 NSL1Q96IY1 281 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 FICDQ9BVA6 458 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 WWP1Q9H0M0 922 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 SLC26A1Q9H2B4 701 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 SRMSQ9H3Y6 488 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 ASB8Q9H765 288 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 IMP3Q9NV31 184 aaKnown RBP4.09□□□□□ -1.75
CSDE1-212ENST00000529046 P4HTMQ9NXG6 502 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 OR6C2Q9NZP2 312 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 RSPH14Q9UHP6 348 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 SNX7Q9UNH6 387 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 PSMD13Q9UNM6 376 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 TMED3Q9Y3Q3 217 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 KLK4Q9Y5K2 254 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 ARL5AQ9Y689 179 aa4.09□□□□□ -1.75
CSDE1-212ENST00000529046 USP9YO00507 2555 aaPredicted RBP4.08□□□□□ -1.76
CSDE1-212ENST00000529046 SLC5A10A0PJK1 596 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 TRIM64A6NGJ6 449 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 TRIM64BA6NI03 449 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 ERI2A8K979 691 aaKnown RBP4.08□□□□□ -1.76
CSDE1-212ENST00000529046 TCP11X1B4DZS4 312 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 E7EQ34 232 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 ZNF749O43361 778 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 GLRA3O75311 464 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 CDK2AP2O75956 126 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 AP2A1O95782 977 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 BAG2O95816 211 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 AGTP01019 485 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 ALPPP05187 535 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 CYP2A7P20853 494 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 CDH3P22223 829 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 JAK1P23458 1154 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 CTNNA2P26232 953 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 STIP1P31948 543 aaKnown RBP4.08□□□□□ -1.76
CSDE1-212ENST00000529046 SHMT2P34897 504 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 MAGEA1P43355 309 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 CCL11P51671 97 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 RWDD2BP57060 319 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 DYNLT1P63172 113 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 DCDP81605 110 aaKnown RBP4.08□□□□□ -1.76
CSDE1-212ENST00000529046 CACNG1Q06432 222 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 ABRQ12979 859 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 SLC5A12Q1EHB4 618 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 DNAJC21Q5F1R6 531 aaKnown RBP4.08□□□□□ -1.76
CSDE1-212ENST00000529046 SLC25A53Q5H9E4 307 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 LRRK2Q5S007 2527 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 LYPLAL1Q5VWZ2 237 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 ARHGAP11AQ6P4F7 1023 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 TRAT1Q6PIZ9 186 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 SPESP1Q6UW49 350 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 IGFL2Q6UWQ7 119 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 CERS6Q6ZMG9 384 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 Q6ZS92 163 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 CDHR3Q6ZTQ4 885 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 SH2D5Q6ZV89 423 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 GALNTL5Q7Z4T8 443 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 LINC00523Q86TU6 105 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 RAB43Q86YS6 212 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 CDKL3Q8IVW4 592 aaPredicted RBP4.08□□□□□ -1.76
CSDE1-212ENST00000529046 EID3Q8N140 333 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 CLEC1AQ8NC01 280 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 FDCSPQ8NFU4 85 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 IPMKQ8NFU5 416 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 OR4K1Q8NGD4 311 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 OR52E1Q8NGJ3 308 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 OR10Q1Q8NGQ4 319 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 OR4C3Q8NH37 302 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 OR1L3Q8NH93 324 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 OR5K2Q8NHB8 316 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 FLVCR1-AS1Q8TAF5 88 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 TFGQ92734 400 aaPredicted RBP4.08□□□□□ -1.76
CSDE1-212ENST00000529046 MR1Q95460 341 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 CDKN2AIPNLQ96HQ2 116 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 ELMO2Q96JJ3 720 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 SPATA13Q96N96 652 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 ZNF285Q96NJ3 590 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 RAB3IPQ96QF0 476 aaPredicted RBP4.08□□□□□ -1.76
CSDE1-212ENST00000529046 NUDT9Q9BW91 350 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 OSBPL8Q9BZF1 889 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 FAM129AQ9BZQ8 928 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 COG4Q9H9E3 785 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 NLE1Q9NVX2 485 aaPredicted RBP4.08□□□□□ -1.76
CSDE1-212ENST00000529046 GPR83Q9NYM4 423 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 TRIM10Q9UDY6 481 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 CRLS1Q9UJA2 301 aa4.08□□□□□ -1.76
CSDE1-212ENST00000529046 ZNF106Q9H2Y7 1883 aaKnown RBP4.07□□□□□ -1.76
CSDE1-212ENST00000529046 TEX15Q9BXT5 2789 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 USP9XQ93008 2570 aaPredicted RBP4.07□□□□□ -1.76
CSDE1-212ENST00000529046 IGHV4-4A0A075B6R2 117 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 A0A0J9YY10 115 aa4.07□□□□□ -1.76
CSDE1-212ENST00000529046 A0A1W2PQ72 361 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms