RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 HCRTR2O43614 444 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 ATP5HO75947 161 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 CPSF4O95639 269 aaKnown RBP7.59□□□□□ -1.19
SSBP3-212ENST00000528930 TP53P04637 393 aaPredicted RBP7.59□□□□□ -1.19
SSBP3-212ENST00000528930 VIMP08670 466 aaKnown RBP7.59□□□□□ -1.19
SSBP3-212ENST00000528930 KRT16P08779 473 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 NPIPA8P0DM63 369 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 PEPDP12955 493 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 UQCRC2P22695 453 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 PSMA4P25789 261 aaKnown RBP7.59□□□□□ -1.19
SSBP3-212ENST00000528930 SOAT1P35610 550 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 CASP9P55211 416 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 TPD52P55327 224 aaPredicted RBP7.59□□□□□ -1.19
SSBP3-212ENST00000528930 RPS26P62854 115 aaKnown RBP7.59□□□□□ -1.19
SSBP3-212ENST00000528930 GUCY1A3Q02108 690 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 SRYQ05066 204 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 PDCD4Q53EL6 469 aaKnown RBP7.59□□□□□ -1.19
SSBP3-212ENST00000528930 KLHL26Q53HC5 615 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.59□□□□□ -1.19
SSBP3-212ENST00000528930 SAXO2Q658L1 398 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 EPGNQ6UW88 154 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 C9orf106Q8NAJ2 232 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 GATSQ8NAP1 163 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 MAPK1IP1LQ8NDC0 245 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 VPS37AQ8NEZ2 397 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 OR4A15Q8NGL6 344 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 MIPOL1Q8TD10 442 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 ITFG2Q969R8 447 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 UTP4Q969X6 686 aaKnown RBP7.59□□□□□ -1.19
SSBP3-212ENST00000528930 CCDC115Q96NT0 180 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 ZNF317Q96PQ6 595 aaPredicted RBP7.59□□□□□ -1.19
SSBP3-212ENST00000528930 SDF2Q99470 211 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 NPAS1Q99742 590 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 CCDC28BQ9BUN5 200 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 SLCO1B3Q9NPD5 702 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 ETAA1Q9NY74 926 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 CLCF1Q9UBD9 225 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 ZNF629Q9UEG4 869 aaPredicted RBP7.59□□□□□ -1.19
SSBP3-212ENST00000528930 BTNL2Q9UIR0 455 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 PCDHGB4Q9UN71 923 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 LRRC42Q9Y546 428 aa7.59□□□□□ -1.19
SSBP3-212ENST00000528930 PRAMEF27A3QJZ7 478 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 DUXAA6NLW8 204 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 H0Y3Z8 333 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 SCDO00767 359 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 GMFGO60234 142 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 FCMRO60667 390 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 SMNDC1O75940 238 aaKnown RBP eCLIP7.58□□□□□ -1.2
SSBP3-212ENST00000528930 RCBTB2O95199 551 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 TGM6O95932 706 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 BMP5P22003 454 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 S100A3P33764 101 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 CDKN2CP42773 168 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 ATP12AP54707 1039 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 SH3BGRP55822 239 aaPredicted RBP7.58□□□□□ -1.2
SSBP3-212ENST00000528930 CLDN20P56880 219 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 ZNF117Q03924 483 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 FOXF2Q12947 444 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 TNK1Q13470 666 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 RCAN2Q14206 197 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 PLPPR5Q32ZL2 321 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 ARHGAP11BQ3KRB8 267 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 FBXL19-AS1Q494R0 122 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 MIDNQ504T8 468 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 RAET1LQ5VY80 246 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 NXNQ6DKJ4 435 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 CBLN3Q6UW01 205 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 OLIG3Q7RTU3 272 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 MISPQ8IVT2 679 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 GLB1L3Q8NCI6 653 aaPredicted RBP7.58□□□□□ -1.2
SSBP3-212ENST00000528930 POC1BQ8TC44 478 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 ZNF524Q96C55 264 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 NEURL3Q96EH8 262 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 SH3YL1Q96HL8 342 aaPredicted RBP7.58□□□□□ -1.2
SSBP3-212ENST00000528930 SLC35G5Q96KT7 338 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 MARK4Q96L34 752 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 C7orf26Q96N11 449 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 PIGQQ9BRB3 760 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 INPP5KQ9BT40 448 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 HOXD1Q9GZZ0 328 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 NSRP1Q9H0G5 558 aaKnown RBP7.58□□□□□ -1.2
SSBP3-212ENST00000528930 OR51I1Q9H343 314 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 SDR39U1Q9NRG7 319 aaPredicted RBP7.58□□□□□ -1.2
SSBP3-212ENST00000528930 TMEM160Q9NX00 188 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 JKAMPQ9P055 326 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 KCNE5Q9UJ90 142 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 ICAM5Q9UMF0 924 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 VDAC3Q9Y277 283 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 USH1CQ9Y6N9 552 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 MED12LQ86YW9 2145 aa7.58□□□□□ -1.2
SSBP3-212ENST00000528930 MALRD1Q5VYJ5 2156 aa7.57□□□□□ -1.2
SSBP3-212ENST00000528930 A0A087WZY1 265 aa7.57□□□□□ -1.2
SSBP3-212ENST00000528930 CENPVL1A0A0U1RR11 272 aa7.57□□□□□ -1.2
SSBP3-212ENST00000528930 C7orf72A4D263 438 aa7.57□□□□□ -1.2
SSBP3-212ENST00000528930 CCDC154A6NI56 674 aa7.57□□□□□ -1.2
SSBP3-212ENST00000528930 H3BML4 177 aa7.57□□□□□ -1.2
SSBP3-212ENST00000528930 DVL2O14641 736 aa7.57□□□□□ -1.2
SSBP3-212ENST00000528930 UBDO15205 165 aa7.57□□□□□ -1.2
SSBP3-212ENST00000528930 EFNA2O43921 213 aa7.57□□□□□ -1.2
SSBP3-212ENST00000528930 TNFRSF21O75509 655 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms