RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 ZNF528Q3MIS6 628 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 MOGAT2Q3SYC2 334 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 C2CD6Q53TS8 623 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 CMPK2Q5EBM0 449 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 LCE1FQ5T754 118 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 WSCD1Q658N2 575 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 PTRHD1Q6GMV3 140 aaKnown RBP4.85□□□□□ -1.63
PCF11-202ENST00000528336 TMEM225Q6GV28 225 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 TMEM53Q6P2H8 277 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 BHLHA15Q7RTS1 189 aaPredicted RBP4.85□□□□□ -1.63
PCF11-202ENST00000528336 SCD5Q86SK9 330 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 M1APQ8TC57 530 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 UBTD2Q8WUN7 234 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 GLYATL1Q969I3 302 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 RAB39BQ96DA2 213 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 CNRIP1Q96F85 164 aaPredicted RBP4.85□□□□□ -1.63
PCF11-202ENST00000528336 LURAP1Q96LR2 239 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 CCT8L2Q96SF2 557 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 PRMT1Q99873 361 aaKnown RBP4.85□□□□□ -1.63
PCF11-202ENST00000528336 PSORS1C1Q9UIG5 152 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 POMT2Q9UKY4 750 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 STAP1Q9ULZ2 295 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 SLC22A14Q9Y267 594 aa4.85□□□□□ -1.63
PCF11-202ENST00000528336 UTRNP46939 3433 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 BRCA1P38398 1863 aaKnown RBP4.84□□□□□ -1.63
PCF11-202ENST00000528336 CCDC162PA2VCL2 907 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 MPTX1A8MV57 137 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 C9JVG2 144 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 E5RGE8 158 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 NPIPA3F8WFD2 350 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 KDELR3O43731 214 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 OR1F1O43749 312 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 DUX1O43812 170 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 IDH3BO43837 385 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 GMNNO75496 209 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 TSPAN12O95859 305 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 APRTP07741 180 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 CCL2P13500 99 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 CCNB1P14635 433 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 NT5EP21589 574 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 PDHA2P29803 388 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 OTX1P32242 354 aaPredicted RBP4.84□□□□□ -1.63
PCF11-202ENST00000528336 BCAP31P51572 246 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 CCR4P51679 360 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 RGS8P57771 180 aaPredicted RBP4.84□□□□□ -1.63
PCF11-202ENST00000528336 OR1D5P58170 312 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 NLRP11P59045 1033 aaKnown RBP4.84□□□□□ -1.63
PCF11-202ENST00000528336 HERV-K104P63124 156 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 FKBP1BP68106 108 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 CYLC2Q14093 348 aaPredicted RBP4.84□□□□□ -1.63
PCF11-202ENST00000528336 METTL7BQ6UX53 244 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 FRRS1Q6ZNA5 592 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 TPGS1Q6ZTW0 290 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 MYPOPQ86VE0 399 aaPredicted RBP4.84□□□□□ -1.63
PCF11-202ENST00000528336 VRK2Q86Y07 508 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 SYT14Q8NB59 555 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 COLGALT1Q8NBJ5 622 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 AQP11Q8NBQ7 271 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 OR4D10Q8NGI6 311 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 C11orf45Q8TAV5 145 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 ZNF596Q8TC21 504 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 DTX3LQ8TDB6 740 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 ELMO1Q92556 727 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 PHYHIPQ92561 330 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 GTF3AQ92664 365 aaKnown RBP4.84□□□□□ -1.63
PCF11-202ENST00000528336 TNFRSF14Q92956 283 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 TM4SF19Q96DZ7 209 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 OMA1Q96E52 524 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 FOXN4Q96NZ1 517 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 ACCSQ96QU6 501 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 TMEM175Q9BSA9 504 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 BBS2Q9BXC9 721 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 NUSAP1Q9BXS6 441 aaKnown RBP4.84□□□□□ -1.63
PCF11-202ENST00000528336 ANKRA2Q9H9E1 313 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 ELOVL3Q9HB03 270 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 TMEM165Q9HC07 324 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 UXTQ9UBK9 157 aaPredicted RBP4.84□□□□□ -1.63
PCF11-202ENST00000528336 BCAP29Q9UHQ4 241 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 SLC12A6Q9UHW9 1150 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 ZNF490Q9ULM2 529 aaPredicted RBP4.84□□□□□ -1.63
PCF11-202ENST00000528336 NCKAP1Q9Y2A7 1128 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 NSG2Q9Y328 171 aa4.84□□□□□ -1.63
PCF11-202ENST00000528336 GLTPD2A6NH11 291 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 LRRIQ3A6PVS8 624 aaPredicted RBP4.83□□□□□ -1.64
PCF11-202ENST00000528336 A8MVM7 634 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 NPIPB9F8W1W9 429 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 SLC1A7O00341 560 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 CLDN5O00501 218 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 ARPC1BO15143 372 aaKnown RBP4.83□□□□□ -1.64
PCF11-202ENST00000528336 HDAC3O15379 428 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 NBR2O15453 112 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 CIAO1O76071 339 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 MBP02144 154 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 CD59P13987 128 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 B4GALT1P15291 398 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 CCT3P49368 545 aaKnown RBP4.83□□□□□ -1.64
PCF11-202ENST00000528336 TMEM50BP56557 158 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 CLDN17P56750 224 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 B2MP61769 119 aa4.83□□□□□ -1.64
PCF11-202ENST00000528336 DHODHQ02127 395 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms