RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 FGF11Q92914 225 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 PFDN5Q99471 154 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 POT1Q9NUX5 634 aa11.61□□□□□ -0.55
TSKU-203ENST00000527881 TNS1Q9HBL0 1735 aaKnown RBP11.6□□□□□ -0.55
TSKU-203ENST00000527881 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.6□□□□□ -0.55
TSKU-203ENST00000527881 MEIS3P1A6NDR6 274 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 SCAMP1O15126 338 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 GSTZ1O43708 216 aaPredicted RBP11.6□□□□□ -0.55
TSKU-203ENST00000527881 FADS1O60427 444 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 GP1BAP07359 652 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 PTH2RP49190 550 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 BDH1Q02338 343 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 RAB33AQ14088 237 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 RBM39Q14498 530 aaKnown RBP11.6□□□□□ -0.55
TSKU-203ENST00000527881 PCGF3Q3KNV8 242 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 ADGRF1Q5T601 910 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 NKAIN4Q8IVV8 208 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 OR8S1Q8NH09 359 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 AUTS2Q8WXX7 1259 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 GAREM1Q9H706 876 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 NEUROD4Q9HD90 331 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 SEMA4GQ9NTN9 838 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 PADI3Q9ULW8 664 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 CHD5Q8TDI0 1954 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 ERAL1O75616 437 aaKnown RBP11.6□□□□□ -0.55
TSKU-203ENST00000527881 POP7O75817 140 aaKnown RBP11.6□□□□□ -0.55
TSKU-203ENST00000527881 VSIG10L2P0DP72 767 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 MGMTP16455 207 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 NFYBP25208 207 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 TAS2R43P59537 309 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 ZNF234Q14588 700 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 FAM83HQ6ZRV2 1179 aaPredicted RBP11.6□□□□□ -0.55
TSKU-203ENST00000527881 MEPCEQ7L2J0 689 aaKnown RBP11.6□□□□□ -0.55
TSKU-203ENST00000527881 MUC20Q8N307 709 aaPredicted RBP11.6□□□□□ -0.55
TSKU-203ENST00000527881 WDR77Q9BQA1 342 aaPredicted RBP11.6□□□□□ -0.55
TSKU-203ENST00000527881 KATNBL1Q9H079 304 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 SYNPO2LQ9H987 977 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 ACSS1Q9NUB1 689 aaPredicted RBP11.6□□□□□ -0.55
TSKU-203ENST00000527881 SH2B3Q9UQQ2 575 aa11.6□□□□□ -0.55
TSKU-203ENST00000527881 RPH3AQ9Y2J0 694 aaPredicted RBP11.6□□□□□ -0.55
TSKU-203ENST00000527881 POM121BA6NF01 834 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 CXCL11O14625 94 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 TSPAN6O43657 245 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 THPOP40225 353 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 PGDP52209 483 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 C9orf152Q5JTZ5 239 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 ELFN2Q5R3F8 820 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 NAA40Q86UY6 237 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 SYNPRQ8TBG9 265 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 TRIM43Q96BQ3 446 aaPredicted RBP11.59□□□□□ -0.55
TSKU-203ENST00000527881 TMEM169Q96HH4 297 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 ZNF649Q9BS31 505 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 EFCAB11Q9BUY7 163 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 AHSPQ9NZD4 102 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 DHCR7Q9UBM7 475 aaKnown RBP11.59□□□□□ -0.55
TSKU-203ENST00000527881 MKL2Q9ULH7 1088 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 GLOD5A6NK44 160 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 SLC25A12O75746 678 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 NDUFB6O95139 128 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 IGSF6O95976 241 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 FGBP02675 491 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 NPBWR1P48145 328 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 CBFBQ13951 182 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 PEA15Q15121 130 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 UNQ6126/PRO20091Q6UXV3 157 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 KRT77Q7Z794 578 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 NR4A3Q92570 626 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 CAMK1GQ96NX5 476 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 UBQLN3Q9H347 655 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 KLHL28Q9NXS3 571 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 KLHL42Q9P2K6 505 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 GHRLQ9UBU3 117 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 C1GALT1C1LP0DN25 315 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 FUT1P19526 365 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 PPT1P50897 306 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 HCCSP53701 268 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 FAM109BQ6ICB4 259 aaPredicted RBP11.59□□□□□ -0.55
TSKU-203ENST00000527881 GLB1LQ6UWU2 654 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 TPRG1Q6ZUI0 275 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 OTUB2Q96DC9 234 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 BBS4Q96RK4 519 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 VRK1Q99986 396 aaPredicted RBP11.59□□□□□ -0.55
TSKU-203ENST00000527881 HCAR1Q9BXC0 346 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 ZDHHC6Q9H6R6 413 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 CEP350Q5VT06 3117 aa11.59□□□□□ -0.55
TSKU-203ENST00000527881 FAM86C2PA6NEL3 165 aa11.58□□□□□ -0.56
TSKU-203ENST00000527881 PLPP2O43688 288 aa11.58□□□□□ -0.56
TSKU-203ENST00000527881 IL5P05113 134 aa11.58□□□□□ -0.56
TSKU-203ENST00000527881 ZNF14P17017 642 aaPredicted RBP11.58□□□□□ -0.56
TSKU-203ENST00000527881 FPR3P25089 353 aa11.58□□□□□ -0.56
TSKU-203ENST00000527881 MPGP29372 298 aa11.58□□□□□ -0.56
TSKU-203ENST00000527881 EIF2S3LQ2VIR3 472 aaKnown RBP11.58□□□□□ -0.56
TSKU-203ENST00000527881 LIN54Q6MZP7 749 aa11.58□□□□□ -0.56
TSKU-203ENST00000527881 HTR3DQ70Z44 454 aa11.58□□□□□ -0.56
TSKU-203ENST00000527881 HAVCR2Q8TDQ0 301 aa11.58□□□□□ -0.56
TSKU-203ENST00000527881 ELP5Q8TE02 316 aa11.58□□□□□ -0.56
TSKU-203ENST00000527881 F2RL3Q96RI0 385 aa11.58□□□□□ -0.56
TSKU-203ENST00000527881 PDCD1LG2Q9BQ51 273 aa11.58□□□□□ -0.56
TSKU-203ENST00000527881 ADARB2Q9NS39 739 aaKnown RBP11.58□□□□□ -0.56
TSKU-203ENST00000527881 CDV3Q9UKY7 258 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms