RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 FAM45AQ8TCE6 357 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 RNASE8Q8TDE3 154 aaKnown RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 GRHL3Q8TE85 626 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 CANT1Q8WVQ1 401 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 PCNPQ8WW12 178 aaKnown RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 PIH1D2Q8WWB5 315 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 ACOT12Q8WYK0 555 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 C3orf49Q96BT1 292 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 FAF2Q96CS3 445 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 COQ8BQ96D53 544 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 SCRN2Q96FV2 425 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 FAHD2AQ96GK7 314 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 ZNF479Q96JC4 524 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 PACRGQ96M98 296 aaPredicted RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 RNF157Q96PX1 679 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 OR2M2Q96R28 347 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 TSNAXQ99598 290 aaKnown RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 RBBP8Q99708 897 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 CITED2Q99967 270 aaPredicted RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 ZNF426Q9BUY5 554 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 FTHL17Q9BXU8 183 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 NLNQ9BYT8 704 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 GLIS2Q9BZE0 524 aaPredicted RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 BARHL1Q9BZE3 327 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 TM6SF2Q9BZW4 377 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 AMBRA1Q9C0C7 1298 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 C20orf27Q9GZN8 174 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 CHST5Q9GZS9 411 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 PCBD2Q9H0N5 130 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 CSTL1Q9H114 145 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 OR52A5Q9H2C5 316 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 SMOC2Q9H3U7 446 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 ST6GALNAC4Q9H4F1 302 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 FBXO44Q9H4M3 255 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 PTGES2Q9H7Z7 377 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 ZBTB20Q9HC78 741 aaPredicted RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 CHST11Q9NPF2 352 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 ACOT13Q9NPJ3 140 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 MIEF1Q9NQG6 463 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 EIF2B3Q9NR50 452 aaKnown RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 SLCO1C1Q9NYB5 712 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 ADA2Q9NZK5 511 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 JKAMPQ9P055 326 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 GCNT4Q9P109 453 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 PAK5Q9P286 719 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 MUTYHQ9UIF7 546 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 NAGKQ9UJ70 344 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 ZNF225Q9UK10 706 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 OR52A1Q9UKL2 312 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 ZNF490Q9ULM2 529 aaPredicted RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 FZD10Q9ULW2 581 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 RNF6Q9Y252 685 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 DRG1Q9Y295 367 aaKnown RBP3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 SLC27A6Q9Y2P4 619 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 KLK4Q9Y5K2 254 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 MTCH2Q9Y6C9 303 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 LTN1O94822 1766 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 SCN11AQ9UI33 1791 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 KIDINS220Q9ULH0 1771 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 TET3O43151 1660 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 LMO7Q8WWI1 1683 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 LOXHD1Q8IVV2 1947 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 IGSF9BQ9UPX0 1349 aa3.42□□□□□ -1.86
CLNS1A-209ENST00000527299 MON2Q7Z3U7 1717 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 TEX13DA0A0J9YY54 714 aaPredicted RBP3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 IQCMA0A1B0GVH7 501 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 FAM240BA0A1B0GVZ2 78 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 TRAPPC13A5PLN9 417 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 FABP12A6NFH5 140 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 CBY3A6NI87 242 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 NKX6-3A6NJ46 265 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 C5orf58C9J3I9 102 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 UBE2Q2LH0YL09 131 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 PDXKO00764 312 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 GRM6O15303 877 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 CHADO15335 359 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 SLC16A3O15427 465 aaKnown RBP3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 OGG1O15527 345 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 RGS10O43665 173 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 TPST1O60507 370 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 PRAMEF2O60811 474 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 TULP3O75386 442 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 KDM4BO94953 1096 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 STBD1O95210 358 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 TBX18O95935 607 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 CALCAP01258 141 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 IGF2P01344 180 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 MT-ND2P03891 347 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 MT-ND4LP03901 98 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 CD2P06729 351 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 C8GP07360 202 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 POU2F2P09086 479 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 GIMD1P0DJR0 217 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 HSD17B1P14061 328 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 TYRP14679 529 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 GABRA1P14867 456 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 ZNF44P15621 663 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 ERCC2P18074 760 aa3.41□□□□□ -1.86
CLNS1A-209ENST00000527299 PGAM1P18669 254 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms