RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 MRPL2Q5T653 305 aaKnown RBP11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 GTF2IRD2BQ6EKJ0 949 aa11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 C3orf33Q6P1S2 294 aa11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 NUFIP2Q7Z417 695 aaKnown RBP11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 GTF2IRD2Q86UP8 949 aa11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 MSRB3Q8IXL7 192 aa11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 PEX5LQ8IYB4 626 aa11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 OR52P1PQ8NH57 321 aa11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 OIT3Q8WWZ8 545 aa11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 MAL2Q969L2 176 aa11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 ZNF775Q96BV0 537 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 ZC3HAV1LQ96H79 300 aaKnown RBP11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 TMEM19Q96HH6 336 aa11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 CCDC106Q9BWC9 280 aa11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 SLC52A3Q9NQ40 469 aa11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 EXOSC3Q9NQT5 275 aaKnown RBP11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 GLRX2Q9NS18 164 aa11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 RLIMQ9NVW2 624 aa11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 ELOVL5Q9NYP7 299 aa11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 TESMINQ9Y4I5 508 aa11.46□□□□□ -0.57
TRAPPC4-205ENST00000525079 MYO9AB2RTY4 2548 aa11.45□□□□□ -0.58
TRAPPC4-205ENST00000525079 C16orf97H3BN30 126 aa11.45□□□□□ -0.58
TRAPPC4-205ENST00000525079 PRKD3O94806 890 aa11.45□□□□□ -0.58
TRAPPC4-205ENST00000525079 PABPC4LP0CB38 370 aaKnown RBP11.45□□□□□ -0.58
TRAPPC4-205ENST00000525079 GKN3PP0CG01 181 aa11.45□□□□□ -0.58
TRAPPC4-205ENST00000525079 CCKARP32238 428 aa11.45□□□□□ -0.58
TRAPPC4-205ENST00000525079 APOBEC1P41238 236 aaKnown RBP11.45□□□□□ -0.58
TRAPPC4-205ENST00000525079 MAGEA8P43361 318 aa11.45□□□□□ -0.58
TRAPPC4-205ENST00000525079 DIO1P49895 249 aa11.45□□□□□ -0.58
TRAPPC4-205ENST00000525079 ATP4BP51164 291 aa11.45□□□□□ -0.58
TRAPPC4-205ENST00000525079 CRISP3P54108 245 aa11.45□□□□□ -0.58
TRAPPC4-205ENST00000525079 RAC3P60763 192 aa11.45□□□□□ -0.58
TRAPPC4-205ENST00000525079 GNA13Q14344 377 aa11.45□□□□□ -0.58
TRAPPC4-205ENST00000525079 RNPS1Q15287 305 aaKnown RBP11.45□□□□□ -0.58
TRAPPC4-205ENST00000525079 TMEM201Q5SNT2 666 aa11.45□□□□□ -0.58
TRAPPC4-205ENST00000525079 ZNF836Q6ZNA1 936 aa11.45□□□□□ -0.58
TRAPPC4-205ENST00000525079 C22orf34Q6ZV56 151 aa11.45□□□□□ -0.58
TRAPPC4-205ENST00000525079 GRINAQ7Z429 371 aa11.45□□□□□ -0.58
TRAPPC4-205ENST00000525079 ADGRG3Q86Y34 549 aa11.45□□□□□ -0.58
TRAPPC4-205ENST00000525079 CMIPQ8IY22 773 aa11.45□□□□□ -0.58
TRAPPC4-205ENST00000525079 MED18Q9BUE0 208 aa11.45□□□□□ -0.58
TRAPPC4-205ENST00000525079 OR11A1Q9GZK7 315 aa11.45□□□□□ -0.58
TRAPPC4-205ENST00000525079 CALML5Q9NZT1 146 aa11.45□□□□□ -0.58
TRAPPC4-205ENST00000525079 C6orf203Q9P0P8 240 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC4-205ENST00000525079 CSMD1Q96PZ7 3565 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 DSPPQ9NZW4 1301 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 TMED7-TICAM2A0A0A6YYA0 188 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 A0A0G2JND7 137 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 A0A0G2JPF8 293 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 TMEM247A6NEH6 219 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 CFAP73A6NFT4 308 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 HNRNPCL2B2RXH8 293 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 HNRNPCL3B7ZW38 293 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 SULT2B1O00204 365 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 SMAD9O15198 467 aaKnown RBP11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 HNRNPCL1O60812 293 aaKnown RBP11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 HRGP04196 525 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 FESP07332 822 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 HNRNPCL4P0DMR1 293 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 TACR3P29371 465 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 IST1P53990 364 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 RASGEF1BQ0VAM2 473 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 EPS8Q12929 822 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 SYT14P1Q58G82 188 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 LRIF1Q5T3J3 769 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 TMPPEQ6ZT21 453 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 C10orf111Q8N326 155 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 CLIP4Q8N3C7 705 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 PMM1Q92871 262 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 ARL5BQ96KC2 179 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 ZNF300Q96RE9 604 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 RAD21L1Q9H4I0 556 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 CCM2LQ9NUG4 571 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 VAPAQ9P0L0 249 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 KLHL13Q9P2N7 655 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 CHRNA9Q9UGM1 479 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 ING1Q9UK53 422 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 ZNF443Q9Y2A4 671 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 PLEKHA6Q9Y2H5 1048 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 TMED7Q9Y3B3 224 aa11.44□□□□□ -0.58
TRAPPC4-205ENST00000525079 OTOGQ6ZRI0 2925 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 A0A1W2PPR1 153 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 TMEM72A0PK05 275 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 CDHR4A6H8M9 788 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 C5orf58C9J3I9 102 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 SIAH2O43255 324 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 YES1P07947 543 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 PRG2P13727 222 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 POLR2HP52434 150 aaKnown RBP11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 OR2B6P58173 313 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 FADDQ13158 208 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 TSC22D1Q15714 1073 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 LIN52Q52LA3 116 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 STAC2Q6ZMT1 411 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 BEND4Q6ZU67 534 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 STK32CQ86UX6 486 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 SLC43A2Q8N370 569 aa11.43□□□□□ -0.58
TRAPPC4-205ENST00000525079 CADM2Q8N3J6 435 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms