RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 TMEM19Q96HH6 336 aa17.08■□□□□ 0.32
FBXO28-205ENST00000523990 REXO5Q96IC2 774 aaKnown RBP17.08■□□□□ 0.32
FBXO28-205ENST00000523990 PLSCR4Q9NRQ2 329 aa17.08■□□□□ 0.32
FBXO28-205ENST00000523990 THUMPD1Q9NXG2 353 aaKnown RBP17.08■□□□□ 0.32
FBXO28-205ENST00000523990 SLC25A37Q9NYZ2 338 aa17.08■□□□□ 0.32
FBXO28-205ENST00000523990 CALML5Q9NZT1 146 aa17.08■□□□□ 0.32
FBXO28-205ENST00000523990 CLIC1O00299 241 aa17.07■□□□□ 0.32
FBXO28-205ENST00000523990 GOSR1O95249 250 aa17.07■□□□□ 0.32
FBXO28-205ENST00000523990 BMP2P12643 396 aa17.07■□□□□ 0.32
FBXO28-205ENST00000523990 CD1EP15812 388 aa17.07■□□□□ 0.32
FBXO28-205ENST00000523990 APOBEC1P41238 236 aaKnown RBP17.07■□□□□ 0.32
FBXO28-205ENST00000523990 KCNJ5P48544 419 aa17.07■□□□□ 0.32
FBXO28-205ENST00000523990 RNPS1Q15287 305 aaKnown RBP17.07■□□□□ 0.32
FBXO28-205ENST00000523990 RGNQ15493 299 aa17.07■□□□□ 0.32
FBXO28-205ENST00000523990 SYT14P1Q58G82 188 aa17.07■□□□□ 0.32
FBXO28-205ENST00000523990 RPS26P11Q5JNZ5 115 aaPredicted RBP17.07■□□□□ 0.32
FBXO28-205ENST00000523990 PAGE3Q5JUK9 113 aa17.07■□□□□ 0.32
FBXO28-205ENST00000523990 SLC25A43Q8WUT9 341 aaPredicted RBP17.07■□□□□ 0.32
FBXO28-205ENST00000523990 OR5B2Q96R09 309 aa17.07■□□□□ 0.32
FBXO28-205ENST00000523990 SLC39A3Q9BRY0 314 aa17.07■□□□□ 0.32
FBXO28-205ENST00000523990 RAD21L1Q9H4I0 556 aa17.07■□□□□ 0.32
FBXO28-205ENST00000523990 ZNF385DQ9H6B1 395 aa17.07■□□□□ 0.32
FBXO28-205ENST00000523990 NPHS2Q9NP85 383 aa17.07■□□□□ 0.32
FBXO28-205ENST00000523990 CTPS2Q9NRF8 586 aa17.07■□□□□ 0.32
FBXO28-205ENST00000523990 SERINC1Q9NRX5 453 aa17.07■□□□□ 0.32
FBXO28-205ENST00000523990 SLAMF8Q9P0V8 285 aa17.07■□□□□ 0.32
FBXO28-205ENST00000523990 KLHL13Q9P2N7 655 aa17.07■□□□□ 0.32
FBXO28-205ENST00000523990 CHRNA9Q9UGM1 479 aa17.07■□□□□ 0.32
FBXO28-205ENST00000523990 NDRG3Q9UGV2 375 aa17.07■□□□□ 0.32
FBXO28-205ENST00000523990 DCTN4Q9UJW0 460 aa17.07■□□□□ 0.32
FBXO28-205ENST00000523990 UQCRHLA0A096LP55 91 aa17.06■□□□□ 0.32
FBXO28-205ENST00000523990 TRBV5-3A0A0A0MS03 114 aa17.06■□□□□ 0.32
FBXO28-205ENST00000523990 IGHV3-15A0A0B4J1V0 119 aa17.06■□□□□ 0.32
FBXO28-205ENST00000523990 FAAHO00519 579 aa17.06■□□□□ 0.32
FBXO28-205ENST00000523990 NUDT7P0C024 238 aa17.06■□□□□ 0.32
FBXO28-205ENST00000523990 ENPP1P22413 925 aa17.06■□□□□ 0.32
FBXO28-205ENST00000523990 DNAJA1P31689 397 aaKnown RBP17.06■□□□□ 0.32
FBXO28-205ENST00000523990 AGKQ53H12 422 aa17.06■□□□□ 0.32
FBXO28-205ENST00000523990 ZNF836Q6ZNA1 936 aa17.06■□□□□ 0.32
FBXO28-205ENST00000523990 VRK2Q86Y07 508 aa17.06■□□□□ 0.32
FBXO28-205ENST00000523990 CDC20BQ86Y33 519 aa17.06■□□□□ 0.32
FBXO28-205ENST00000523990 OR52P1PQ8NH57 321 aa17.06■□□□□ 0.32
FBXO28-205ENST00000523990 SIKE1Q9BRV8 207 aa17.06■□□□□ 0.32
FBXO28-205ENST00000523990 GP6Q9HCN6 339 aa17.06■□□□□ 0.32
FBXO28-205ENST00000523990 VAPAQ9P0L0 249 aa17.06■□□□□ 0.32
FBXO28-205ENST00000523990 SPIN1Q9Y657 262 aaPredicted RBP17.06■□□□□ 0.32
FBXO28-205ENST00000523990 HIVEP1P15822 2718 aa17.06■□□□□ 0.32
FBXO28-205ENST00000523990 CDHR4A6H8M9 788 aa17.05■□□□□ 0.32
FBXO28-205ENST00000523990 SMAD9O15198 467 aaKnown RBP17.05■□□□□ 0.32
FBXO28-205ENST00000523990 IDH2P48735 452 aaKnown RBP17.05■□□□□ 0.32
FBXO28-205ENST00000523990 DIO1P49895 249 aa17.05■□□□□ 0.32
FBXO28-205ENST00000523990 EPS8Q12929 822 aa17.05■□□□□ 0.32
FBXO28-205ENST00000523990 EXOC3L2Q2M3D2 409 aa17.05■□□□□ 0.32
FBXO28-205ENST00000523990 LIN52Q52LA3 116 aa17.05■□□□□ 0.32
FBXO28-205ENST00000523990 RNF220Q5VTB9 566 aa17.05■□□□□ 0.32
FBXO28-205ENST00000523990 SLC43A2Q8N370 569 aa17.05■□□□□ 0.32
FBXO28-205ENST00000523990 MAL2Q969L2 176 aa17.05■□□□□ 0.32
FBXO28-205ENST00000523990 C12orf49Q9H741 205 aa17.05■□□□□ 0.32
FBXO28-205ENST00000523990 A4GALTQ9NPC4 353 aa17.05■□□□□ 0.32
FBXO28-205ENST00000523990 RLIMQ9NVW2 624 aa17.05■□□□□ 0.32
FBXO28-205ENST00000523990 KLHL28Q9NXS3 571 aa17.05■□□□□ 0.32
FBXO28-205ENST00000523990 ING1Q9UK53 422 aaPredicted RBP17.05■□□□□ 0.32
FBXO28-205ENST00000523990 ITGB1BP2Q9UKP3 347 aa17.05■□□□□ 0.32
FBXO28-205ENST00000523990 ZNF443Q9Y2A4 671 aaPredicted RBP17.05■□□□□ 0.32
FBXO28-205ENST00000523990 GMEB1Q9Y692 573 aa17.05■□□□□ 0.32
FBXO28-205ENST00000523990 A0A0G2JPF8 293 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 A0A1W2PP18 115 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 TMEM247A6NEH6 219 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 CFAP73A6NFT4 308 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 HNRNPCL2B2RXH8 293 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 HNRNPCL3B7ZW38 293 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 C16orf97H3BN30 126 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 HNRNPCL1O60812 293 aaKnown RBP17.04■□□□□ 0.32
FBXO28-205ENST00000523990 PRKD3O94806 890 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 HRGP04196 525 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 THBS1P07996 1170 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 HNRNPCL4P0DMR1 293 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 KLK2P20151 261 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 TMEM201Q5SNT2 666 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 TMPPEQ6ZT21 453 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 ADGRG3Q86Y34 549 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 TUSC5Q8IXB3 177 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 C10orf111Q8N326 155 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 WFIKKN1Q96NZ8 548 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 PSD2Q9BQI7 771 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 LIME1Q9H400 295 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 RABEP2Q9H5N1 569 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 BCO1Q9HAY6 547 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 BCL2L10Q9HD36 194 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 KLHL9Q9P2J3 617 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 CHST2Q9Y4C5 530 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 A0A0G2JND7 137 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 CYTIPO60759 359 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 NCF2P19878 526 aaPredicted RBP17.04■□□□□ 0.32
FBXO28-205ENST00000523990 HTR3AP46098 478 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 CSNK2A1P68400 391 aaPredicted RBP17.04■□□□□ 0.32
FBXO28-205ENST00000523990 TESK1Q15569 626 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 PRAMEF8Q5VWM4 474 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 PRAMEF7Q5VXH5 474 aa17.04■□□□□ 0.32
FBXO28-205ENST00000523990 FBXW10Q5XX13 1052 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms