RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 GALNT18Q6P9A2 607 aa11.94□□□□□ -0.5
NKX3-1-202ENST00000523261 CASP12Q6UXS9 341 aa11.94□□□□□ -0.5
NKX3-1-202ENST00000523261 MMGT1Q8N4V1 131 aa11.94□□□□□ -0.5
NKX3-1-202ENST00000523261 OR6Y1Q8NGX8 325 aa11.94□□□□□ -0.5
NKX3-1-202ENST00000523261 FBXO30Q8TB52 745 aa11.94□□□□□ -0.5
NKX3-1-202ENST00000523261 CKAP2Q8WWK9 683 aa11.94□□□□□ -0.5
NKX3-1-202ENST00000523261 BOD1Q96IK1 185 aa11.94□□□□□ -0.5
NKX3-1-202ENST00000523261 AMDHD1Q96NU7 426 aa11.94□□□□□ -0.5
NKX3-1-202ENST00000523261 PCTPQ9UKL6 214 aa11.94□□□□□ -0.5
NKX3-1-202ENST00000523261 CARD8Q9Y2G2 431 aa11.94□□□□□ -0.5
NKX3-1-202ENST00000523261 E7ESA3 106 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 SULT2B1O00204 365 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 PIN1P1O15428 100 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 HPXP02790 462 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 IFI6P09912 130 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 CECR9P0C854 216 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 VSIG8P0DPA2 414 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 ACP2P11117 423 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 CHN1P15882 459 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 DDCP20711 480 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 MPGP29372 298 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 CRABP2P29373 138 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 SPRP35270 261 aaPredicted RBP11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 RNF144AP50876 292 aaPredicted RBP11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 ZNF75DP51815 510 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 TMEM33P57088 247 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 CSNK2A1P68400 391 aaPredicted RBP11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 POU3F1Q03052 451 aaPredicted RBP11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 VPS26BQ4G0F5 336 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 DCAF12L2Q5VW00 463 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 LETMD1Q6P1Q0 360 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 MTERF4Q7Z6M4 381 aaKnown RBP11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 RIBC1Q8N443 379 aaPredicted RBP11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 PTGR2Q8N8N7 351 aaPredicted RBP11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 CDKL2Q92772 493 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 YIPF5Q969M3 257 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 SLC25A28Q96A46 364 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 ANKRD27Q96NW4 1050 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 CITED1Q99966 193 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 SEC61A2Q9H9S3 476 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 OBP2BQ9NPH6 170 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 ZNF275Q9NSD4 429 aaPredicted RBP11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 CRNNQ9UBG3 495 aaPredicted RBP11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 GRID1Q9ULK0 1009 aa11.93□□□□□ -0.5
NKX3-1-202ENST00000523261 VSTM5A8MXK1 200 aa11.92□□□□□ -0.5
NKX3-1-202ENST00000523261 PPP6CO00743 305 aa11.92□□□□□ -0.5
NKX3-1-202ENST00000523261 PRPS2P11908 318 aa11.92□□□□□ -0.5
NKX3-1-202ENST00000523261 NTSP30990 170 aa11.92□□□□□ -0.5
NKX3-1-202ENST00000523261 BAMBIQ13145 260 aa11.92□□□□□ -0.5
NKX3-1-202ENST00000523261 FAM83EQ2M2I3 478 aa11.92□□□□□ -0.5
NKX3-1-202ENST00000523261 NDUFAF6Q330K2 333 aa11.92□□□□□ -0.5
NKX3-1-202ENST00000523261 ZNF311Q5JNZ3 666 aa11.92□□□□□ -0.5
NKX3-1-202ENST00000523261 CDRT4Q8N9R6 151 aa11.92□□□□□ -0.5
NKX3-1-202ENST00000523261 PIGXQ8TBF5 258 aa11.92□□□□□ -0.5
NKX3-1-202ENST00000523261 RDH5Q92781 318 aa11.92□□□□□ -0.5
NKX3-1-202ENST00000523261 TMIGD2Q96BF3 282 aa11.92□□□□□ -0.5
NKX3-1-202ENST00000523261 QRSL1Q9H0R6 528 aaKnown RBP11.92□□□□□ -0.5
NKX3-1-202ENST00000523261 ZNF665Q9H7R5 613 aa11.92□□□□□ -0.5
NKX3-1-202ENST00000523261 TAS2R7Q9NYW3 318 aa11.92□□□□□ -0.5
NKX3-1-202ENST00000523261 NFU1Q9UMS0 254 aa11.92□□□□□ -0.5
NKX3-1-202ENST00000523261 SNX6Q9UNH7 406 aa11.92□□□□□ -0.5
NKX3-1-202ENST00000523261 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 FAM159BA6NKW6 160 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 CLDN34H7C241 214 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 PGRMC1O00264 195 aaKnown RBP11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 TP73O15350 636 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 PPIHO43447 177 aaKnown RBP11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 DEAF1O75398 565 aaPredicted RBP11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 IGLV1-44P01699 117 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 HSD3B1P14060 373 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 CDH2P19022 906 aaPredicted RBP11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 OMGP23515 440 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 HSD3B2P26439 372 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 SSTR1P30872 391 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 TIA1P31483 386 aaKnown RBP eCLIP11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 QPRTQ15274 297 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 DUSP5Q16690 384 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 C3orf36Q3SXR2 165 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 TBRG1Q3YBR2 411 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 TIGD2Q4W5G0 525 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 CCNJQ5T5M9 372 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 RPS27LQ71UM5 84 aaKnown RBP11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 CCDC103Q8IW40 242 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 UBE2FQ969M7 185 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 PHF21BQ96EK2 531 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 GIMAP5Q96F15 307 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 APIPQ96GX9 242 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 ZNF48Q96MX3 618 aaPredicted RBP11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 GPR78Q96P69 363 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 RBM4BQ9BQ04 359 aaKnown RBP11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 EBPLQ9BY08 206 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 C7orf69Q9H7B7 122 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 LZTFL1Q9NQ48 299 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 ZNF225Q9UK10 706 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 ARHGAP32A7KAX9 2087 aa11.91□□□□□ -0.5
NKX3-1-202ENST00000523261 TIMM23O14925 209 aa11.9□□□□□ -0.5
NKX3-1-202ENST00000523261 SCAMP2O15127 329 aaKnown RBP11.9□□□□□ -0.5
NKX3-1-202ENST00000523261 RP2O75695 350 aa11.9□□□□□ -0.5
NKX3-1-202ENST00000523261 KNG1P01042 644 aa11.9□□□□□ -0.5
NKX3-1-202ENST00000523261 PAX7P23759 505 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms