RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 ATG4DQ86TL0 474 aaPredicted RBP11.88□□□□□ -0.51
CPNE3-205ENST00000522240 PLCZ1Q86YW0 608 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 CADM2Q8N3J6 435 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 OR4K17Q8NGC6 315 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 OR52J3Q8NH60 311 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 ZNF563Q8TA94 476 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 HS6ST2Q96MM7 605 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 RDH12Q96NR8 316 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 SIGLEC12Q96PQ1 595 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 SMAD5Q99717 465 aaKnown RBP11.88□□□□□ -0.51
CPNE3-205ENST00000522240 PRSS27Q9BQR3 290 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 PTGES2Q9H7Z7 377 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 COQ10BQ9H8M1 238 aa11.88□□□□□ -0.51
CPNE3-205ENST00000522240 PDP1Q9P0J1 537 aaPredicted RBP11.88□□□□□ -0.51
CPNE3-205ENST00000522240 KLF13Q9Y2Y9 288 aaPredicted RBP11.88□□□□□ -0.51
CPNE3-205ENST00000522240 ASH1LQ9NR48 2969 aaKnown RBP11.88□□□□□ -0.51
CPNE3-205ENST00000522240 A0A087WUU8 490 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 A0A087WV48 116 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 A0A087WZY1 265 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 B4DXG7 233 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 FAM47E-STBD1D6RA91 191 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 PDLIM1O00151 329 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 NME2P1O60361 137 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 ADAP00813 363 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 IGF2P01344 180 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 ALPLP05186 524 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 CNR1P21554 472 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 FUT4P22083 530 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 NME2P22392 152 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 IFNGR2P38484 337 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 HTR3AP46098 478 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 ZNF41P51814 821 aaPredicted RBP11.87□□□□□ -0.51
CPNE3-205ENST00000522240 ARG2P78540 354 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 SEC23BQ15437 767 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 RFX4Q33E94 735 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 OTUD3Q5T2D3 398 aaPredicted RBP11.87□□□□□ -0.51
CPNE3-205ENST00000522240 TIGD3Q6B0B8 471 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 ZNF770Q6IQ21 691 aaPredicted RBP11.87□□□□□ -0.51
CPNE3-205ENST00000522240 FAHD1Q6P587 224 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 PODNL1Q6PEZ8 512 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 ZNF730Q6ZMV8 503 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 GRINAQ7Z429 371 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 NKAIN4Q8IVV8 208 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 RNF113BQ8IZP6 322 aaKnown RBP11.87□□□□□ -0.51
CPNE3-205ENST00000522240 HS3ST5Q8IZT8 346 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 WDSUB1Q8N9V3 476 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 OR4K5Q8NGD3 323 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 OR1J4Q8NGS1 313 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 SNRNP27Q8WVK2 155 aaKnown RBP11.87□□□□□ -0.51
CPNE3-205ENST00000522240 TM9SF4Q92544 642 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 C1GALT1C1Q96EU7 318 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 KLHDC3Q9BQ90 382 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 FAM173AQ9BQD7 235 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 ADAM19Q9H013 955 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 DSN1Q9H410 356 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 KRCC1Q9NPI7 259 aaPredicted RBP11.87□□□□□ -0.51
CPNE3-205ENST00000522240 MED11Q9P086 117 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 KIF17Q9P2E2 1029 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 BOKQ9UMX3 212 aaPredicted RBP11.87□□□□□ -0.51
CPNE3-205ENST00000522240 MGAT4BQ9UQ53 548 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 RAXQ9Y2V3 346 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 PCDHGB7Q9Y5F8 929 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 HEATR5AQ86XA9 2040 aa11.87□□□□□ -0.51
CPNE3-205ENST00000522240 A0A087WUJ7 227 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 C7orf72A4D263 438 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 HTR3EA5X5Y0 456 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 LRRC3CA6NJW4 275 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 GNB5O14775 395 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 OR10H3O60404 316 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 NTN1O95631 604 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 PRKCAP17252 672 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 CBLP22681 906 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 HSPA13P48723 471 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 DNASE1L1P49184 302 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 POLR2HP52434 150 aaKnown RBP11.86□□□□□ -0.51
CPNE3-205ENST00000522240 UGT2B15P54855 530 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 DSCR4P56555 118 aaPredicted RBP11.86□□□□□ -0.51
CPNE3-205ENST00000522240 LAPTM4AQ15012 233 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 PLPPR5Q32ZL2 321 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 KDM4DQ6B0I6 523 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 SPINK14Q6IE38 97 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 OR5M10Q6IEU7 315 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 SLC25A25Q6KCM7 469 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 PGBD2Q6P3X8 592 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 BORAQ6PGQ7 559 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 C19orf48Q6RUI8 117 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 TBPL2Q6SJ96 375 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 IZUMO2Q6UXV1 221 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 LINC00114Q6XXX2 140 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 WDR88Q6ZMY6 472 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 MBOAT2Q6ZWT7 520 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 TMEM178AQ8NBL3 297 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 OR2M7Q8NG81 312 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 OR9Q2Q8NGE9 314 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 PIGXQ8TBF5 258 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 TMEM255BQ8WV15 326 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 TMEM239Q8WW34 195 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 SCMH1Q96GD3 660 aa11.86□□□□□ -0.51
CPNE3-205ENST00000522240 MRGPRX4Q96LA9 322 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms