RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 ARL13AQ5H913 290 aaPredicted RBP2.54□□□□□ -2
SKP1-204ENST00000517691 TCHHL1Q5QJ38 904 aaPredicted RBP2.54□□□□□ -2
SKP1-204ENST00000517691 CCNYL2Q5T2Q4 361 aa2.54□□□□□ -2
SKP1-204ENST00000517691 LRIF1Q5T3J3 769 aa2.54□□□□□ -2
SKP1-204ENST00000517691 FAM219BQ5XKK7 198 aa2.54□□□□□ -2
SKP1-204ENST00000517691 FCRLBQ6BAA4 426 aa2.54□□□□□ -2
SKP1-204ENST00000517691 CLEC6AQ6EIG7 209 aa2.54□□□□□ -2
SKP1-204ENST00000517691 ZNF517Q6ZMY9 492 aaPredicted RBP2.54□□□□□ -2
SKP1-204ENST00000517691 ZNF813Q6ZN06 617 aa2.54□□□□□ -2
SKP1-204ENST00000517691 COX15Q7KZN9 410 aa2.54□□□□□ -2
SKP1-204ENST00000517691 RNF144BQ7Z419 303 aa2.54□□□□□ -2
SKP1-204ENST00000517691 CLNKQ7Z7G1 428 aa2.54□□□□□ -2
SKP1-204ENST00000517691 RTN4RL2Q86UN3 420 aa2.54□□□□□ -2
SKP1-204ENST00000517691 GPR180Q86V85 440 aa2.54□□□□□ -2
SKP1-204ENST00000517691 ZDHHC21Q8IVQ6 265 aa2.54□□□□□ -2
SKP1-204ENST00000517691 CA13Q8N1Q1 262 aa2.54□□□□□ -2
SKP1-204ENST00000517691 ACOT4Q8N9L9 421 aa2.54□□□□□ -2
SKP1-204ENST00000517691 OR5M3Q8NGP4 307 aa2.54□□□□□ -2
SKP1-204ENST00000517691 WDR20Q8TBZ3 569 aa2.54□□□□□ -2
SKP1-204ENST00000517691 AGAP11Q8TF27 550 aa2.54□□□□□ -2
SKP1-204ENST00000517691 C8orf44Q96CB5 159 aa2.54□□□□□ -2
SKP1-204ENST00000517691 TRMT61AQ96FX7 289 aaKnown RBP2.54□□□□□ -2
SKP1-204ENST00000517691 TPD52L3Q96J77 140 aa2.54□□□□□ -2
SKP1-204ENST00000517691 IP6K3Q96PC2 410 aa2.54□□□□□ -2
SKP1-204ENST00000517691 ZNF382Q96SR6 550 aa2.54□□□□□ -2
SKP1-204ENST00000517691 SERPINI1Q99574 410 aa2.54□□□□□ -2
SKP1-204ENST00000517691 SH3GL1Q99961 368 aa2.54□□□□□ -2
SKP1-204ENST00000517691 GATA5Q9BWX5 397 aaPredicted RBP2.54□□□□□ -2
SKP1-204ENST00000517691 C1QTNF3Q9BXJ4 246 aa2.54□□□□□ -2
SKP1-204ENST00000517691 SLC29A3Q9BZD2 475 aa2.54□□□□□ -2
SKP1-204ENST00000517691 VN1R1Q9GZP7 353 aa2.54□□□□□ -2
SKP1-204ENST00000517691 ING2Q9H160 280 aa2.54□□□□□ -2
SKP1-204ENST00000517691 SLC26A1Q9H2B4 701 aa2.54□□□□□ -2
SKP1-204ENST00000517691 PRORYQ9H606 182 aa2.54□□□□□ -2
SKP1-204ENST00000517691 ZNF160Q9HCG1 818 aa2.54□□□□□ -2
SKP1-204ENST00000517691 PNO1Q9NRX1 252 aaKnown RBP2.54□□□□□ -2
SKP1-204ENST00000517691 VSX1Q9NZR4 365 aaPredicted RBP2.54□□□□□ -2
SKP1-204ENST00000517691 NDUFA13Q9P0J0 144 aa2.54□□□□□ -2
SKP1-204ENST00000517691 KCNN3Q9UGI6 736 aa2.54□□□□□ -2
SKP1-204ENST00000517691 FBXL4Q9UKA2 621 aa2.54□□□□□ -2
SKP1-204ENST00000517691 A4GNTQ9UNA3 340 aa2.54□□□□□ -2
SKP1-204ENST00000517691 MRPS33Q9Y291 106 aaKnown RBP2.54□□□□□ -2
SKP1-204ENST00000517691 COPG1Q9Y678 874 aaKnown RBP2.54□□□□□ -2
SKP1-204ENST00000517691 EPG5Q9HCE0 2579 aa2.53□□□□□ -2
SKP1-204ENST00000517691 NBEAQ8NFP9 2946 aa2.53□□□□□ -2
SKP1-204ENST00000517691 CELSR3Q9NYQ7 3312 aa2.53□□□□□ -2
SKP1-204ENST00000517691 PTPRBP23467 1997 aa2.53□□□□□ -2
SKP1-204ENST00000517691 IGLV3-12A0A075B6K2 115 aa2.53□□□□□ -2
SKP1-204ENST00000517691 NSG1A0A0A6YYJ2 146 aa2.53□□□□□ -2
SKP1-204ENST00000517691 IGHV3-20A0A0C4DH32 117 aa2.53□□□□□ -2
SKP1-204ENST00000517691 GNG14A0A1W2PPG7 69 aa2.53□□□□□ -2
SKP1-204ENST00000517691 FAM230AA0A1W2PPH8 454 aa2.53□□□□□ -2
SKP1-204ENST00000517691 CDHR4A6H8M9 788 aa2.53□□□□□ -2
SKP1-204ENST00000517691 VSTM2BA6NLU5 285 aa2.53□□□□□ -2
SKP1-204ENST00000517691 A8MUI8 341 aa2.53□□□□□ -2
SKP1-204ENST00000517691 H3BQF6 201 aa2.53□□□□□ -2
SKP1-204ENST00000517691 NDUFS8O00217 210 aa2.53□□□□□ -2
SKP1-204ENST00000517691 ETV2O00321 342 aaPredicted RBP2.53□□□□□ -2
SKP1-204ENST00000517691 PLPP1O14494 284 aa2.53□□□□□ -2
SKP1-204ENST00000517691 AZIN1O14977 448 aa2.53□□□□□ -2
SKP1-204ENST00000517691 BIRC5O15392 142 aa2.53□□□□□ -2
SKP1-204ENST00000517691 HOXA3O43365 443 aaPredicted RBP2.53□□□□□ -2
SKP1-204ENST00000517691 AKR7A2O43488 359 aa2.53□□□□□ -2
SKP1-204ENST00000517691 RGS14O43566 566 aa2.53□□□□□ -2
SKP1-204ENST00000517691 TLX2O43763 284 aaPredicted RBP2.53□□□□□ -2
SKP1-204ENST00000517691 CIDEAO60543 219 aa2.53□□□□□ -2
SKP1-204ENST00000517691 EEDO75530 441 aaKnown RBP2.53□□□□□ -2
SKP1-204ENST00000517691 LYPLA1O75608 230 aaPredicted RBP2.53□□□□□ -2
SKP1-204ENST00000517691 MYO1DO94832 1006 aa2.53□□□□□ -2
SKP1-204ENST00000517691 SPDEFO95238 335 aa2.53□□□□□ -2
SKP1-204ENST00000517691 ETHE1O95571 254 aa2.53□□□□□ -2
SKP1-204ENST00000517691 TBX6O95947 436 aaPredicted RBP2.53□□□□□ -2
SKP1-204ENST00000517691 SERPINE1P05121 402 aa2.53□□□□□ -2
SKP1-204ENST00000517691 CHRNGP07510 517 aa2.53□□□□□ -2
SKP1-204ENST00000517691 CHRM4P08173 479 aa2.53□□□□□ -2
SKP1-204ENST00000517691 ZCCHC18P0CG32 403 aa2.53□□□□□ -2
SKP1-204ENST00000517691 SMIM10L1P0DMW3 83 aa2.53□□□□□ -2
SKP1-204ENST00000517691 TROVE2P10155 538 aaKnown RBP eCLIP2.53□□□□□ -2
SKP1-204ENST00000517691 TNNI3P19429 210 aa2.53□□□□□ -2
SKP1-204ENST00000517691 BGNP21810 368 aa2.53□□□□□ -2
SKP1-204ENST00000517691 PRKACBP22694 351 aa2.53□□□□□ -2
SKP1-204ENST00000517691 TUBG1P23258 451 aa2.53□□□□□ -2
SKP1-204ENST00000517691 ATP5A1P25705 553 aaKnown RBP2.53□□□□□ -2
SKP1-204ENST00000517691 PRDX6P30041 224 aa2.53□□□□□ -2
SKP1-204ENST00000517691 UQCRC1P31930 480 aa2.53□□□□□ -2
SKP1-204ENST00000517691 NUP62P37198 522 aaPredicted RBP2.53□□□□□ -2
SKP1-204ENST00000517691 SLC1A6P48664 564 aa2.53□□□□□ -2
SKP1-204ENST00000517691 GZMKP49863 264 aa2.53□□□□□ -2
SKP1-204ENST00000517691 HTR6P50406 440 aa2.53□□□□□ -2
SKP1-204ENST00000517691 MAPK12P53778 367 aa2.53□□□□□ -2
SKP1-204ENST00000517691 FOXA1P55317 472 aa2.53□□□□□ -2
SKP1-204ENST00000517691 LIM2P55344 173 aa2.53□□□□□ -2
SKP1-204ENST00000517691 RAB38P57729 211 aa2.53□□□□□ -2
SKP1-204ENST00000517691 OR4D2P58180 307 aa2.53□□□□□ -2
SKP1-204ENST00000517691 TAS2R50P59544 299 aa2.53□□□□□ -2
SKP1-204ENST00000517691 ABCE1P61221 599 aaKnown RBP2.53□□□□□ -2
SKP1-204ENST00000517691 ID2Q02363 134 aa2.53□□□□□ -2
SKP1-204ENST00000517691 EEF1A2Q05639 463 aaKnown RBP2.53□□□□□ -2
SKP1-204ENST00000517691 ACSM2AQ08AH3 577 aa2.53□□□□□ -2
SKP1-204ENST00000517691 RIN1Q13671 783 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms