RNA–Protein interactions for RNA: ENST00000517276.1

SCARNA11.3-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 130 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.3-201ENST00000517276 GCKRQ14397 625 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 EMC2Q15006 297 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 TSC22D1Q15714 1073 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 DUSP7Q16829 419 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 TRIM16LQ309B1 348 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 MS4A18Q3C1V0 323 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 GTDC1Q4AE62 458 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 CYBRD1Q53TN4 286 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 WDR38Q5JTN6 314 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 PPM1LQ5SGD2 360 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 FAM120AOSQ5T036 256 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 C9orf135Q5VTT2 229 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 ZNF626Q68DY1 528 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 OR8G2PQ6IF36 304 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 CAPRIN2Q6IMN6 1127 aaKnown RBP2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 REEP3Q6NUK4 255 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 H3F3CQ6NXT2 135 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 STAC2Q6ZMT1 411 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 MOB2Q70IA6 237 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 PTF1AQ7RTS3 328 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 FAM122BQ7Z309 247 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 RD3Q7Z3Z2 195 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 PTAR1Q7Z6K3 402 aaPredicted RBP2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 SLC47A2Q86VL8 602 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 LACC1Q8IV20 430 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 MFSD6LQ8IWD5 586 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 ST13P4Q8IZP2 240 aaPredicted RBP2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 MYOCDQ8IZQ8 938 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 PELI3Q8N2H9 469 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 BPIFB2Q8N4F0 458 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 MARVELD2Q8N4S9 558 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 TPRX1Q8N7U7 411 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 ZNRF1Q8ND25 227 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 TRPV1Q8NER1 839 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 OR6F1Q8NGZ6 308 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 ANGPTL6Q8NI99 470 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 TCP10LQ8TDR4 215 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 SETD7Q8WTS6 366 aaKnown RBP2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 GATAD1Q8WUU5 269 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 C17orf50Q8WW18 174 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 CAPSLQ8WWF8 208 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 TOMM40LQ969M1 308 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 MRGPRFQ96AM1 343 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 C8orf44Q96CB5 159 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 ST6GAL2Q96JF0 529 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 ALS2CR12Q96Q35 445 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 OR5B2Q96R09 309 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 ATP5SQ99766 215 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 PELOQ9BRX2 385 aaKnown RBP2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 NIPSNAP3BQ9BS92 247 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 TMEM175Q9BSA9 504 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 FEM1AQ9BSK4 669 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 SYT11Q9BT88 431 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 LRRC1Q9BTT6 524 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 ZNF747Q9BV97 191 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 NDEL1Q9GZM8 345 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 RACGAP1Q9H0H5 632 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 RAB1BQ9H0U4 201 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 LIME1Q9H400 295 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 NT5DC2Q9H857 520 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 EBF2Q9HAK2 575 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 RETNQ9HD89 108 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 SIX2Q9NPC8 291 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 IL1RAPQ9NPH3 570 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 MS4A12Q9NXJ0 267 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 EURLQ9NYK6 297 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 KLK11Q9UBX7 282 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 CLN8Q9UBY8 286 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 NUP50Q9UKX7 468 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 DHRS7Q9Y394 339 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 ATP6V1DQ9Y5K8 247 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 GMPPBQ9Y5P6 360 aa2.28□□□□□ -2.04
SCARNA11.3-201ENST00000517276 KCNE1BA0A087WTH5 132 aa2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 NSG1A0A0A6YYJ2 146 aa2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 IGHV2-70DA0A0C4DH43 119 aa2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 IQANK1A0A1B0GTG1 560 aa2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 MSGN1A6NI15 193 aa2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 SAGE2PA6NJ88 616 aa2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 LRRIQ3A6PVS8 624 aaPredicted RBP2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 RSPH10B2B2RC85 870 aa2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 NPIPB9F8W1W9 429 aa2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 GFYI3L273 518 aa2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 FBP2O00757 339 aa2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 GOSR2O14653 212 aa2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 HSD17B6O14756 317 aa2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 AIM2O14862 343 aa2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 GPAA1O43292 621 aa2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 CALUO43852 315 aaPredicted RBP2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 PRKNO60260 465 aaPredicted RBP2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 GMDSO60547 372 aa2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 SCN2BO60939 215 aa2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 ENTPD5O75356 428 aa2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 CDC123O75794 336 aaPredicted RBP2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 OR7A10O76100 309 aa2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 SMC2O95347 1197 aa2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 BRI3O95415 125 aa2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 LCA5LO95447 670 aa2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 OXSR1O95747 527 aaPredicted RBP2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 HOXD4P09016 255 aaPredicted RBP2.27□□□□□ -2.05
SCARNA11.3-201ENST00000517276 ACAA1P09110 424 aaPredicted RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms