RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 NEDD4P46934 1319 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 FHOD3Q2V2M9 1422 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 ADAMTS20P59510 1910 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 TMEM272A0A1B0GTI8 110 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 GLTPD2A6NH11 291 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 CENPXA8MT69 81 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 SIRPB1O00241 398 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 XRCC2O43543 280 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 XPNPEP2O43895 674 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 CHST1O43916 411 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 GAGE7O76087 117 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 NDUFB8O95169 186 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 ALDOBP05062 364 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 NGFRP08138 427 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 KRT16P08779 473 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 GAGE12FP0CL80 117 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 GAGE12GP0CL81 117 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 GAGE12IP0CL82 117 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 IGHV4-30-4P0DP06 118 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 FGF3P11487 239 aaPredicted RBP3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 PSMC3P17980 439 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 EFNA1P20827 205 aaPredicted RBP3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 SYT1P21579 422 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 GPD1P21695 349 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 CA6P23280 308 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 ATP5A1P25705 553 aaKnown RBP3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 CFPP27918 469 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 PKNOX1P55347 436 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 XGP55808 180 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 LINC00310P59036 64 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 BRWD1-AS2P59051 145 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 PRPS1P60891 318 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 VBP1P61758 197 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 ID2Q02363 134 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 IFFO1Q0D2I5 559 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 GAGE1Q13065 139 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 GAGE4Q13068 117 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 ICAM4Q14773 271 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 SLC17A1Q14916 467 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 SNCBQ16143 134 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 KYAT1Q16773 422 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 PAN3Q58A45 887 aaKnown RBP3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 TMEM31Q5JXX7 168 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 SPANXN4Q5MJ08 99 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 MFSD14CQ5VZR4 134 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 ZNF585AQ6P3V2 769 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 GFRALQ6UXV0 394 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 ZNF836Q6ZNA1 936 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 Q6ZVQ6 151 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 FAM122BQ7Z309 247 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 TSEN54Q7Z6J9 526 aaKnown RBP3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 TMEM219Q86XT9 240 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 ZBED8Q8IZ13 594 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 CMTM1Q8IZ96 169 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 KIR3DL3Q8N743 410 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 GVQW1Q8N7I0 195 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 FCAMRQ8WWV6 532 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 SORCS1Q8WY21 1168 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 MYDGFQ969H8 173 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 XPO6Q96QU8 1125 aaKnown RBP3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 LPAR4Q99677 370 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 TIMP4Q99727 224 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 NIPSNAP3BQ9BS92 247 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 C9orf16Q9BUW7 83 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 ULBP2Q9BZM5 246 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 UCK2Q9BZX2 261 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 SRRQ9GZT4 340 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 NAA50Q9GZZ1 169 aaKnown RBP3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 KIR3DX1Q9H7L2 352 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 NHEJ1Q9H9Q4 299 aaPredicted RBP3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 VCX3AQ9NNX9 186 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 TEX10Q9NXF1 929 aaPredicted RBP3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 KIF25Q9UIL4 384 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 DHRS7Q9Y394 339 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 EXOSC1Q9Y3B2 195 aaKnown RBP3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 GMPPBQ9Y5P6 360 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 TSSC4Q9Y5U2 329 aaPredicted RBP3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 UBN2Q6ZU65 1347 aa3.44□□□□□ -1.86
RNU4-60P-201ENST00000517239 COL4A3Q01955 1670 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 A0A0A6YYH2 397 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 NSG1A0A0A6YYJ2 146 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 A0A1B0GVT2 93 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 FABP12A6NFH5 140 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 A6NJ64 397 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 E7EWF7 191 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 NEDD8-MDP1E9PL57 170 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 RNASEK-C17orf49H0YIS7 233 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 BLOC1S5-TXNDC5H3BN57 136 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 GOLGA8MH3BSY2 632 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 FCN1O00602 326 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 NDUFAB1O14561 156 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 LIN7AO14910 233 aaPredicted RBP3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 PPP1R2P9O14990 202 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 B4GALT5O43286 388 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 NUAK1O60285 661 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 PFKFB2O60825 505 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 SC5DO75845 299 aa3.43□□□□□ -1.86
RNU4-60P-201ENST00000517239 NOL4O94818 638 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms