RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 ELK4P28324 431 aa10.25□□□□□ -0.77
VCAN-212ENST00000515397 DNAJA1P31689 397 aaKnown RBP10.25□□□□□ -0.77
VCAN-212ENST00000515397 CCKARP32238 428 aa10.25□□□□□ -0.77
VCAN-212ENST00000515397 UGT2B10P36537 528 aa10.25□□□□□ -0.77
VCAN-212ENST00000515397 ANXA11P50995 505 aaKnown RBP10.25□□□□□ -0.77
VCAN-212ENST00000515397 EEF1A1P68104 462 aaKnown RBP10.25□□□□□ -0.77
VCAN-212ENST00000515397 HOXC5Q00444 222 aa10.25□□□□□ -0.77
VCAN-212ENST00000515397 SORDQ00796 357 aa10.25□□□□□ -0.77
VCAN-212ENST00000515397 LRRC74AQ0VAA2 488 aa10.25□□□□□ -0.77
VCAN-212ENST00000515397 SELENBP1Q13228 472 aa10.25□□□□□ -0.77
VCAN-212ENST00000515397 DAZAP2Q15038 168 aaPredicted RBP10.25□□□□□ -0.77
VCAN-212ENST00000515397 RGNQ15493 299 aa10.25□□□□□ -0.77
VCAN-212ENST00000515397 EEF1A1P5Q5VTE0 462 aa10.25□□□□□ -0.77
VCAN-212ENST00000515397 ZNF836Q6ZNA1 936 aa10.25□□□□□ -0.77
VCAN-212ENST00000515397 ADGRG3Q86Y34 549 aa10.25□□□□□ -0.77
VCAN-212ENST00000515397 FAM71CQ8NEG0 241 aa10.25□□□□□ -0.77
VCAN-212ENST00000515397 OR52P1PQ8NH57 321 aa10.25□□□□□ -0.77
VCAN-212ENST00000515397 GMPPAQ96IJ6 420 aaPredicted RBP10.25□□□□□ -0.77
VCAN-212ENST00000515397 ARL5BQ96KC2 179 aa10.25□□□□□ -0.77
VCAN-212ENST00000515397 SLC39A3Q9BRY0 314 aa10.25□□□□□ -0.77
VCAN-212ENST00000515397 CCDC106Q9BWC9 280 aa10.25□□□□□ -0.77
VCAN-212ENST00000515397 RSPO3Q9BXY4 272 aaPredicted RBP10.25□□□□□ -0.77
VCAN-212ENST00000515397 TIGARQ9NQ88 270 aa10.25□□□□□ -0.77
VCAN-212ENST00000515397 PLSCR4Q9NRQ2 329 aa10.25□□□□□ -0.77
VCAN-212ENST00000515397 CCM2LQ9NUG4 571 aaPredicted RBP10.25□□□□□ -0.77
VCAN-212ENST00000515397 PAQR5Q9NXK6 330 aaPredicted RBP10.25□□□□□ -0.77
VCAN-212ENST00000515397 VAPAQ9P0L0 249 aa10.25□□□□□ -0.77
VCAN-212ENST00000515397 P2RX2Q9UBL9 471 aa10.25□□□□□ -0.77
VCAN-212ENST00000515397 HIVEP1P15822 2718 aa10.25□□□□□ -0.77
VCAN-212ENST00000515397 FREM1Q5H8C1 2179 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 A0A096LPI6 279 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 TMEM72A0PK05 275 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 GJE1A6NN92 205 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 C16orf97H3BN30 126 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 SULT2B1O00204 365 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 ETV2O00321 342 aaPredicted RBP10.24□□□□□ -0.77
VCAN-212ENST00000515397 SIAH2O43255 324 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 PRKD3O94806 890 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 GUSBP08236 651 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 CD8BP10966 210 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 NID1P14543 1247 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 HOXB9P17482 250 aaPredicted RBP10.24□□□□□ -0.77
VCAN-212ENST00000515397 RPS4Y1P22090 263 aaKnown RBP10.24□□□□□ -0.77
VCAN-212ENST00000515397 TACR3P29371 465 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 AGTR1P30556 359 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 DIO1P49895 249 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 IST1P53990 364 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 RAC3P60763 192 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 AP1ARQ63HQ0 302 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 C3orf33Q6P1S2 294 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 TMPPEQ6ZT21 453 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 MSANTD1Q6ZTZ1 278 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 CCDC103Q8IW40 242 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 PEX5LQ8IYB4 626 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 OR6K3Q8NGY3 331 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 NFKBIDQ8NI38 313 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 RNF128Q8TEB7 428 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 TMEM234Q8WY98 164 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 ST8SIA1Q92185 356 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 DACH2Q96NX9 599 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 ZNF300Q96RE9 604 aaPredicted RBP10.24□□□□□ -0.77
VCAN-212ENST00000515397 MED18Q9BUE0 208 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 PRR14Q9BWN1 585 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 IKZF5Q9H5V7 419 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 SERINC1Q9NRX5 453 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 KLHL13Q9P2N7 655 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 NDRG3Q9UGV2 375 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 ING1Q9UK53 422 aaPredicted RBP10.24□□□□□ -0.77
VCAN-212ENST00000515397 CHST2Q9Y4C5 530 aa10.24□□□□□ -0.77
VCAN-212ENST00000515397 TMED7-TICAM2A0A0A6YYA0 188 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 ZC3H12DA2A288 527 aaKnown RBP10.23□□□□□ -0.77
VCAN-212ENST00000515397 CFAP73A6NFT4 308 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 ZNF814B7Z6K7 855 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 SMAD9O15198 467 aaKnown RBP10.23□□□□□ -0.77
VCAN-212ENST00000515397 RAMP1O60894 148 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 HRGP04196 525 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 DBIP07108 87 aaKnown RBP10.23□□□□□ -0.77
VCAN-212ENST00000515397 FESP07332 822 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 PEX19P40855 299 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 APOBEC1P41238 236 aaKnown RBP10.23□□□□□ -0.77
VCAN-212ENST00000515397 ACAA2P42765 397 aaKnown RBP10.23□□□□□ -0.77
VCAN-212ENST00000515397 MRPL19P49406 292 aaKnown RBP10.23□□□□□ -0.77
VCAN-212ENST00000515397 CRISP3P54108 245 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 OR2B6P58173 313 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 RASGEF1BQ0VAM2 473 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 EPS8Q12929 822 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 BNIP2Q12982 314 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 SQLEQ14534 574 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 SYT14P1Q58G82 188 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 TMEM201Q5SNT2 666 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 GTF2IRD2BQ6EKJ0 949 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 STAC2Q6ZMT1 411 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 GRINAQ7Z429 371 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 GTF2IRD2Q86UP8 949 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 RETREG3Q86VR2 466 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 CADM2Q8N3J6 435 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 CPNE4Q96A23 557 aaPredicted RBP10.23□□□□□ -0.77
VCAN-212ENST00000515397 TMEM120AQ9BXJ8 343 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 FGFR1OP2Q9NVK5 253 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 ELOVL5Q9NYP7 299 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms