RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 WDR77Q9BQA1 342 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-213ENST00000514442 KLHL42Q9P2K6 505 aa12.28□□□□□ -0.44
TCOF1-213ENST00000514442 NDRG3Q9UGV2 375 aa12.28□□□□□ -0.44
TCOF1-213ENST00000514442 KIR2DS3Q14952 304 aa12.28□□□□□ -0.44
TCOF1-213ENST00000514442 CCSMST1Q4G0I0 132 aa12.28□□□□□ -0.44
TCOF1-213ENST00000514442 TMEM81Q6P7N7 255 aa12.28□□□□□ -0.44
TCOF1-213ENST00000514442 ZNF227Q86WZ6 799 aa12.28□□□□□ -0.44
TCOF1-213ENST00000514442 ZNF101Q8IZC7 436 aa12.28□□□□□ -0.44
TCOF1-213ENST00000514442 NSMAFQ92636 917 aa12.28□□□□□ -0.44
TCOF1-213ENST00000514442 PITX2Q99697 317 aa12.28□□□□□ -0.44
TCOF1-213ENST00000514442 CNIH4Q9P003 139 aa12.28□□□□□ -0.44
TCOF1-213ENST00000514442 CLEC2DQ9UHP7 191 aa12.28□□□□□ -0.44
TCOF1-213ENST00000514442 COL5A3P25940 1745 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-213ENST00000514442 TRAV20A0A0B4J274 112 aa12.28□□□□□ -0.44
TCOF1-213ENST00000514442 ANTXRLA6NF34 631 aa12.28□□□□□ -0.44
TCOF1-213ENST00000514442 KIAA0355O15063 1070 aa12.28□□□□□ -0.44
TCOF1-213ENST00000514442 ALG10BQ5I7T1 473 aa12.28□□□□□ -0.44
TCOF1-213ENST00000514442 OR2G6Q5TZ20 316 aa12.28□□□□□ -0.44
TCOF1-213ENST00000514442 IL22RA1Q8N6P7 574 aa12.28□□□□□ -0.44
TCOF1-213ENST00000514442 LILRB1Q8NHL6 650 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-213ENST00000514442 SPRYD4Q8WW59 207 aaPredicted RBP12.28□□□□□ -0.44
TCOF1-213ENST00000514442 TM9SF4Q92544 642 aa12.28□□□□□ -0.44
TCOF1-213ENST00000514442 RBP7Q96R05 134 aa12.28□□□□□ -0.44
TCOF1-213ENST00000514442 NDUFB11Q9NX14 153 aa12.28□□□□□ -0.44
TCOF1-213ENST00000514442 SNX11Q9Y5W9 270 aa12.28□□□□□ -0.44
TCOF1-213ENST00000514442 C13orf42A0A1B0GVH6 325 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 D6RAR5 112 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 E9PI62 339 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 IGLV3-25P01717 112 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 S100GP29377 79 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 RAB5CP51148 216 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 HTR4Q13639 388 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 FCRLBQ6BAA4 426 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 ALG1LQ6GMV1 187 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 CORO6Q6QEF8 472 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 ZNF740Q8NDX6 193 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 TMEM234Q8WY98 164 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 UCN3Q969E3 161 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 KCTD12Q96CX2 325 aaKnown RBP12.27□□□□□ -0.44
TCOF1-213ENST00000514442 MS4A4EQ96PG1 132 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 TIMM29Q9BSF4 260 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 MYNNQ9NPC7 610 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 SIX6O95475 246 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 ACVR1BP36896 505 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 ARHGAP19Q14CB8 494 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 EXOSC7Q15024 291 aaKnown RBP12.27□□□□□ -0.44
TCOF1-213ENST00000514442 C8orf82Q6P1X6 216 aaPredicted RBP12.27□□□□□ -0.44
TCOF1-213ENST00000514442 OR1J4Q8NGS1 313 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 OR8S1Q8NH09 359 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 OR5K2Q8NHB8 316 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 NANPQ8TBE9 248 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 SLC41A3Q96GZ6 507 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 NIPSNAP1Q9BPW8 284 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 PRDM9Q9NQV7 894 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 TAAR2Q9P1P5 351 aa12.27□□□□□ -0.44
TCOF1-213ENST00000514442 DIMT1Q9UNQ2 313 aaKnown RBP12.27□□□□□ -0.44
TCOF1-213ENST00000514442 TP53I11O14683 189 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 GKN3PP0CG01 181 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 ZNF250P15622 560 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 NDUFV2P19404 249 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 CLRN1P58418 232 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 ZNF77Q15935 545 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 PYCR3Q53H96 274 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 IL20RBQ6UXL0 311 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 QSOX2Q6ZRP7 698 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 POGLUT1Q8NBL1 392 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 CHAC2Q8WUX2 184 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 C7orf34Q96L11 122 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 ENTPD2Q9Y5L3 495 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 CYB5AP00167 134 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 EGFP01133 1207 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 ACP2P11117 423 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 F3P13726 295 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 CXCL12P48061 93 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 GPR143P51810 404 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 ERV3-1Q14264 604 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 GAS6Q14393 721 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 C3orf38Q5JPI3 329 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 HBMQ6B0K9 141 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 MS4A15Q8N5U1 240 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 NANOGP1Q8N7R0 232 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 VN1R2Q8NFZ6 395 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 WDFY2Q96P53 400 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 ZNF768Q9H5H4 540 aaKnown RBP12.27□□□□□ -0.45
TCOF1-213ENST00000514442 MTHFD2LQ9H903 347 aaPredicted RBP12.27□□□□□ -0.45
TCOF1-213ENST00000514442 FBXL3Q9UKT7 428 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 COL24A1Q17RW2 1714 aa12.27□□□□□ -0.45
TCOF1-213ENST00000514442 STMND1H3BQB6 276 aa12.26□□□□□ -0.45
TCOF1-213ENST00000514442 K7ESM1 405 aa12.26□□□□□ -0.45
TCOF1-213ENST00000514442 LGALS8O00214 317 aa12.26□□□□□ -0.45
TCOF1-213ENST00000514442 KCNJ5P48544 419 aa12.26□□□□□ -0.45
TCOF1-213ENST00000514442 ARFRP1Q13795 201 aa12.26□□□□□ -0.45
TCOF1-213ENST00000514442 GBX1Q14549 363 aa12.26□□□□□ -0.45
TCOF1-213ENST00000514442 PEA15Q15121 130 aa12.26□□□□□ -0.45
TCOF1-213ENST00000514442 KCTD9Q7L273 389 aa12.26□□□□□ -0.45
TCOF1-213ENST00000514442 OR6V1Q8N148 313 aa12.26□□□□□ -0.45
TCOF1-213ENST00000514442 SLC44A3Q8N4M1 653 aa12.26□□□□□ -0.45
TCOF1-213ENST00000514442 CDS1Q92903 461 aa12.26□□□□□ -0.45
TCOF1-213ENST00000514442 OPALINQ96PE5 141 aa12.26□□□□□ -0.45
TCOF1-213ENST00000514442 TMEM202A6NGA9 273 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms