RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 TMEM19Q96HH6 336 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 REXO5Q96IC2 774 aaKnown RBP11.85□□□□□ -0.51
RNF4-215ENST00000511843 MAGEB18Q96M61 343 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 DACH2Q96NX9 599 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 SLC39A3Q9BRY0 314 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 CCDC106Q9BWC9 280 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 OR11A1Q9GZK7 315 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 NPHS2Q9NP85 383 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 SLC52A3Q9NQ40 469 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 TIGARQ9NQ88 270 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 PLSCR4Q9NRQ2 329 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 ZNF446Q9NWS9 450 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 P2RX2Q9UBL9 471 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 DCTN4Q9UJW0 460 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 PLEKHA6Q9Y2H5 1048 aa11.85□□□□□ -0.51
RNF4-215ENST00000511843 C16orf97H3BN30 126 aa11.84□□□□□ -0.51
RNF4-215ENST00000511843 CLIC1O00299 241 aa11.84□□□□□ -0.51
RNF4-215ENST00000511843 SMAD9O15198 467 aaKnown RBP11.84□□□□□ -0.51
RNF4-215ENST00000511843 HRGP04196 525 aa11.84□□□□□ -0.51
RNF4-215ENST00000511843 FESP07332 822 aa11.84□□□□□ -0.51
RNF4-215ENST00000511843 TFPTP0C1Z6 253 aa11.84□□□□□ -0.51
RNF4-215ENST00000511843 GKN3PP0CG01 181 aa11.84□□□□□ -0.51
RNF4-215ENST00000511843 NCF2P19878 526 aaPredicted RBP11.84□□□□□ -0.51
RNF4-215ENST00000511843 MRPL19P49406 292 aaKnown RBP11.84□□□□□ -0.51
RNF4-215ENST00000511843 IST1P53990 364 aa11.84□□□□□ -0.51
RNF4-215ENST00000511843 SF3A3Q12874 501 aaKnown RBP eCLIP11.84□□□□□ -0.51
RNF4-215ENST00000511843 TSC22D1Q15714 1073 aa11.84□□□□□ -0.51
RNF4-215ENST00000511843 SYT14P1Q58G82 188 aa11.84□□□□□ -0.51
RNF4-215ENST00000511843 BLOC1S3Q6QNY0 202 aa11.84□□□□□ -0.51
RNF4-215ENST00000511843 ZNF836Q6ZNA1 936 aa11.84□□□□□ -0.51
RNF4-215ENST00000511843 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.84□□□□□ -0.51
RNF4-215ENST00000511843 C10orf111Q8N326 155 aa11.84□□□□□ -0.51
RNF4-215ENST00000511843 TMEM234Q8WY98 164 aa11.84□□□□□ -0.51
RNF4-215ENST00000511843 SPDL1Q96EA4 605 aa11.84□□□□□ -0.51
RNF4-215ENST00000511843 ARL5BQ96KC2 179 aa11.84□□□□□ -0.51
RNF4-215ENST00000511843 MED18Q9BUE0 208 aa11.84□□□□□ -0.51
RNF4-215ENST00000511843 MTHFD2LQ9H903 347 aaPredicted RBP11.84□□□□□ -0.51
RNF4-215ENST00000511843 EXOSC3Q9NQT5 275 aaKnown RBP11.84□□□□□ -0.51
RNF4-215ENST00000511843 CCM2LQ9NUG4 571 aaPredicted RBP11.84□□□□□ -0.51
RNF4-215ENST00000511843 ELOVL5Q9NYP7 299 aa11.84□□□□□ -0.51
RNF4-215ENST00000511843 KLHL13Q9P2N7 655 aa11.84□□□□□ -0.51
RNF4-215ENST00000511843 NDRG3Q9UGV2 375 aa11.84□□□□□ -0.51
RNF4-215ENST00000511843 ST6GALNAC2Q9UJ37 374 aa11.84□□□□□ -0.51
RNF4-215ENST00000511843 ING1Q9UK53 422 aaPredicted RBP11.84□□□□□ -0.51
RNF4-215ENST00000511843 MED13LQ71F56 2210 aa11.84□□□□□ -0.51
RNF4-215ENST00000511843 DSPPQ9NZW4 1301 aa11.84□□□□□ -0.51
RNF4-215ENST00000511843 A0A096LPI6 279 aa11.83□□□□□ -0.52
RNF4-215ENST00000511843 SULT2B1O00204 365 aa11.83□□□□□ -0.52
RNF4-215ENST00000511843 CASKO14936 926 aa11.83□□□□□ -0.52
RNF4-215ENST00000511843 EDF1O60869 148 aaKnown RBP11.83□□□□□ -0.52
RNF4-215ENST00000511843 DBIP07108 87 aaKnown RBP11.83□□□□□ -0.52
RNF4-215ENST00000511843 PRG2P13727 222 aa11.83□□□□□ -0.52
RNF4-215ENST00000511843 EDNRAP25101 427 aa11.83□□□□□ -0.52
RNF4-215ENST00000511843 DIO1P49895 249 aa11.83□□□□□ -0.52
RNF4-215ENST00000511843 ART1P52961 327 aa11.83□□□□□ -0.52
RNF4-215ENST00000511843 CRISP3P54108 245 aa11.83□□□□□ -0.52
RNF4-215ENST00000511843 RAC3P60763 192 aa11.83□□□□□ -0.52
RNF4-215ENST00000511843 TXNL4AP83876 142 aaKnown RBP11.83□□□□□ -0.52
RNF4-215ENST00000511843 RGNQ15493 299 aa11.83□□□□□ -0.52
RNF4-215ENST00000511843 TESK1Q15569 626 aa11.83□□□□□ -0.52
RNF4-215ENST00000511843 TMEM201Q5SNT2 666 aa11.83□□□□□ -0.52
RNF4-215ENST00000511843 STAC2Q6ZMT1 411 aa11.83□□□□□ -0.52
RNF4-215ENST00000511843 GRINAQ7Z429 371 aa11.83□□□□□ -0.52
RNF4-215ENST00000511843 ADGRG3Q86Y34 549 aa11.83□□□□□ -0.52
RNF4-215ENST00000511843 PEX5LQ8IYB4 626 aa11.83□□□□□ -0.52
RNF4-215ENST00000511843 CLIP4Q8N3C7 705 aa11.83□□□□□ -0.52
RNF4-215ENST00000511843 OR52P1PQ8NH57 321 aa11.83□□□□□ -0.52
RNF4-215ENST00000511843 OIT3Q8WWZ8 545 aa11.83□□□□□ -0.52
RNF4-215ENST00000511843 ZNF300Q96RE9 604 aaPredicted RBP11.83□□□□□ -0.52
RNF4-215ENST00000511843 SERINC1Q9NRX5 453 aa11.83□□□□□ -0.52
RNF4-215ENST00000511843 GLRX2Q9NS18 164 aa11.83□□□□□ -0.52
RNF4-215ENST00000511843 VAPAQ9P0L0 249 aa11.83□□□□□ -0.52
RNF4-215ENST00000511843 CHRNA9Q9UGM1 479 aa11.83□□□□□ -0.52
RNF4-215ENST00000511843 ZNF443Q9Y2A4 671 aaPredicted RBP11.83□□□□□ -0.52
RNF4-215ENST00000511843 RAI1Q7Z5J4 1906 aaPredicted RBP11.83□□□□□ -0.52
RNF4-215ENST00000511843 PRRC2AP48634 2157 aaKnown RBP11.82□□□□□ -0.52
RNF4-215ENST00000511843 TMED7-TICAM2A0A0A6YYA0 188 aa11.82□□□□□ -0.52
RNF4-215ENST00000511843 TMEM72A0PK05 275 aa11.82□□□□□ -0.52
RNF4-215ENST00000511843 ZC3H12DA2A288 527 aaKnown RBP11.82□□□□□ -0.52
RNF4-215ENST00000511843 DEFB108AA8MXU0 73 aa11.82□□□□□ -0.52
RNF4-215ENST00000511843 PRKD3O94806 890 aa11.82□□□□□ -0.52
RNF4-215ENST00000511843 TACR3P29371 465 aa11.82□□□□□ -0.52
RNF4-215ENST00000511843 APOBEC1P41238 236 aaKnown RBP11.82□□□□□ -0.52
RNF4-215ENST00000511843 RASGEF1BQ0VAM2 473 aa11.82□□□□□ -0.52
RNF4-215ENST00000511843 EPS8Q12929 822 aa11.82□□□□□ -0.52
RNF4-215ENST00000511843 SQLEQ14534 574 aa11.82□□□□□ -0.52
RNF4-215ENST00000511843 RNPS1Q15287 305 aaKnown RBP11.82□□□□□ -0.52
RNF4-215ENST00000511843 LRIF1Q5T3J3 769 aa11.82□□□□□ -0.52
RNF4-215ENST00000511843 GTF2IRD2BQ6EKJ0 949 aa11.82□□□□□ -0.52
RNF4-215ENST00000511843 TFAP2EQ6VUC0 442 aa11.82□□□□□ -0.52
RNF4-215ENST00000511843 GTF2IRD2Q86UP8 949 aa11.82□□□□□ -0.52
RNF4-215ENST00000511843 CXorf67Q86X51 503 aaPredicted RBP11.82□□□□□ -0.52
RNF4-215ENST00000511843 CMIPQ8IY22 773 aa11.82□□□□□ -0.52
RNF4-215ENST00000511843 PIK3IP1Q96FE7 263 aa11.82□□□□□ -0.52
RNF4-215ENST00000511843 PSD2Q9BQI7 771 aa11.82□□□□□ -0.52
RNF4-215ENST00000511843 RSPO3Q9BXY4 272 aaPredicted RBP11.82□□□□□ -0.52
RNF4-215ENST00000511843 IKZF5Q9H5V7 419 aa11.82□□□□□ -0.52
RNF4-215ENST00000511843 PLEKHF2Q9H8W4 249 aa11.82□□□□□ -0.52
RNF4-215ENST00000511843 OSGIN1Q9UJX0 560 aa11.82□□□□□ -0.52
RNF4-215ENST00000511843 TMED7Q9Y3B3 224 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms