RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 FGF1P05230 155 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 FAM200BP0CF97 657 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 C8orf89P0DMQ9 161 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 HNF4AP41235 474 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 TNFSF10P50591 281 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 NDST1P52848 882 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 CASP9P55211 416 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 RPP38P78345 283 aaKnown RBP2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 ARF5P84085 180 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 TFAMQ00059 246 aaKnown RBP2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 AKAP17AQ02040 695 aaKnown RBP2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 NCF4Q15080 339 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 NECTIN1Q15223 517 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 IRF4Q15306 451 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 ZNF674Q2M3X9 581 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 SLC25A35Q3KQZ1 300 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 FAM106AQ4KMX7 169 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 FASTKD1Q53R41 847 aaKnown RBP2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 ARMCX4Q5H9R4 360 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 LCE3CQ5T5A8 94 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 PM20D1Q6GTS8 502 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 FRRS1Q6ZNA5 592 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 TMEM126BQ8IUX1 230 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 CCDC71Q8IV32 467 aaPredicted RBP2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 AQP12AQ8IXF9 295 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 KLHDC8AQ8IYD2 350 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 CCDC170Q8IYT3 715 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 TMEM99Q8N816 258 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 SPC24Q8NBT2 197 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 CCL4L1Q8NHW4 92 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 PATE1Q8WXA2 126 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 OR1E3Q8WZA6 343 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 GTF3AQ92664 365 aaKnown RBP2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 PTP4A1Q93096 173 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 RAB7BQ96AH8 199 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 RASL10BQ96S79 203 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 OVOL2Q9BRP0 275 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 NMUR1Q9HB89 426 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 MED29Q9NX70 200 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 KLHL21Q9UJP4 597 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 ODF2LQ9ULJ1 636 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 OR1A2Q9Y585 309 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 PRSS21Q9Y6M0 314 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 PIKFYVEQ9Y2I7 2098 aa2.92□□□□□ -1.94
TOPBP1-208ENST00000511439 LOC105371242A0A075B767 164 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 TUBAL3A6NHL2 446 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 USP27XA6NNY8 438 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 NPIPA5E9PKD4 350 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 H0YCG3 227 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 H0YIG0 161 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 CACNB4O00305 520 aaPredicted RBP2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 RTCAO00442 366 aaKnown RBP2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 SURF4O15260 269 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 MLNRO43193 412 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 PNPP00491 289 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 HLA-DPA1P20036 260 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 EDNRAP25101 427 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 SRD5A2P31213 254 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 CASP3P42574 277 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 KHKP50053 298 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 MLF1P58340 268 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 KIAA1024LP59773 190 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 BPIFB3P59826 476 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 ACY1Q03154 408 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 CAPRIN1Q14444 709 aaKnown RBP2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 CLEC12BQ2HXU8 276 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 AGAP6Q5VW22 663 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 KCTD16Q68DU8 428 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 RFWD3Q6PCD5 774 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 CHMP1BQ7LBR1 199 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 STRADAQ7RTN6 431 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 PRSS42Q7Z5A4 293 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 LRRTM1Q86UE6 522 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 HSCBQ8IWL3 235 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 SLC22A15Q8IZD6 547 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 ARHGAP18Q8N392 663 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 TEX26Q8N6G2 289 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 CSGALNACT2Q8N6G5 542 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 ARL6IP6Q8N6S5 226 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 CCDC185Q8N715 623 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 CXorf40AQ8TE69 158 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 HAS2Q92819 552 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 SNX21Q969T3 373 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 EEF2KMTQ96G04 330 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 CDKN2AIPNLQ96HQ2 116 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 PYGO2Q9BRQ0 406 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 APOOQ9BUR5 198 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 XPO4Q9C0E2 1151 aaKnown RBP2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 TNMDQ9H2S6 317 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 DPEP3Q9H4B8 488 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 POLD4Q9HCU8 107 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 B3GAT2Q9NPZ5 323 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 TEX10Q9NXF1 929 aaPredicted RBP2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 MOSPD1Q9UJG1 213 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 NPIPA1Q9UND3 350 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 KIF3AQ9Y496 699 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 WIPI2Q9Y4P8 454 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 SEC16AO15027 2179 aa2.91□□□□□ -1.94
TOPBP1-208ENST00000511439 ABCA1O95477 2261 aa2.9□□□□□ -1.94
TOPBP1-208ENST00000511439 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms