RNA–Protein interactions for RNA: ENST00000511316.1

HMGB2-205, Transcript of high mobility group box 2, humanhuman

TSL 2

Gene HMGB2, Length 1,841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-205ENST00000511316 PRDM9Q9NQV7 894 aa11.9□□□□□ -0.5
HMGB2-205ENST00000511316 BABAM2Q9NXR7 383 aa11.9□□□□□ -0.5
HMGB2-205ENST00000511316 LRIT1Q9P2V4 623 aa11.9□□□□□ -0.5
HMGB2-205ENST00000511316 ELF5Q9UKW6 265 aaPredicted RBP11.9□□□□□ -0.5
HMGB2-205ENST00000511316 CACNG2Q9Y698 323 aa11.9□□□□□ -0.5
HMGB2-205ENST00000511316 EPG5Q9HCE0 2579 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 TRBV23OR9-2A0A075B6M9 112 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 SLC22A31A6NKX4 558 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 B4DGG1 531 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 GTPBP1O00178 669 aaKnown RBP11.89□□□□□ -0.51
HMGB2-205ENST00000511316 RNF13O43567 381 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 PRAF2O60831 178 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 MT-ND5P03915 603 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 SERPIND1P05546 499 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 TPOP07202 933 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 PNLIPP16233 465 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 MPIP34949 423 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 SSR2P43308 183 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 OMPP47874 163 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 TGM4P49221 684 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 NCBP2P52298 156 aaKnown RBP eCLIP11.89□□□□□ -0.511e-9■■□□□ 11.4
HMGB2-205ENST00000511316 FLYWCH1Q4VC44 716 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.89□□□□□ -0.51
HMGB2-205ENST00000511316 NDUFAF5Q5TEU4 345 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 HES3Q5TGS1 186 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 WASH2PQ6VEQ5 465 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 ZNF620Q6ZNG0 422 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 ASPGQ86U10 573 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 LRRTM4Q86VH4 590 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 KIF18BQ86Y91 864 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 RBM45Q8IUH3 476 aaKnown RBP11.89□□□□□ -0.51
HMGB2-205ENST00000511316 BRIX1Q8TDN6 353 aaKnown RBP11.89□□□□□ -0.51
HMGB2-205ENST00000511316 ZNF431Q8TF32 576 aaPredicted RBP11.89□□□□□ -0.51
HMGB2-205ENST00000511316 PHYHIPQ92561 330 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 CCDC74AQ96AQ1 378 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 LRFN5Q96NI6 719 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 F2RL3Q96RI0 385 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 SECISBP2Q96T21 854 aaKnown RBP11.89□□□□□ -0.51
HMGB2-205ENST00000511316 TIMM29Q9BSF4 260 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 TMED9Q9BVK6 235 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 OSGEPL1Q9H4B0 414 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 GLIPR2Q9H4G4 154 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 B3GAT2Q9NPZ5 323 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 ABRACLQ9P1F3 81 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 ZNF624Q9P2J8 865 aaPredicted RBP11.89□□□□□ -0.51
HMGB2-205ENST00000511316 KCNN3Q9UGI6 736 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 ACSL5Q9ULC5 683 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 BAIAP2Q9UQB8 552 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 TMEM5Q9Y2B1 443 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 CLCA3PQ9Y6N3 262 aa11.89□□□□□ -0.51
HMGB2-205ENST00000511316 C12orf71A8MTZ7 269 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 C1QTNF9BB2RNN3 333 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 ICMTO60725 284 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 KCNJ13O60928 360 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 SLC22A5O76082 557 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 UBL3O95164 117 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 MT-CO3P00414 261 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 C1QTNF9P0C862 333 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 SAGP10523 405 aaPredicted RBP11.88□□□□□ -0.51
HMGB2-205ENST00000511316 UGT2B7P16662 529 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 CSNK2A2P19784 350 aaPredicted RBP11.88□□□□□ -0.51
HMGB2-205ENST00000511316 AHCYP23526 432 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 AVPR1BP47901 424 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 FASLGP48023 281 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 RAB14P61106 215 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 CCL7P80098 99 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 MEF2AQ02078 507 aaPredicted RBP11.88□□□□□ -0.51
HMGB2-205ENST00000511316 ZNF155Q12901 538 aaPredicted RBP11.88□□□□□ -0.51
HMGB2-205ENST00000511316 GPR176Q14439 515 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 CEP78Q5JTW2 689 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 METRNLQ641Q3 311 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 BCDIN3DQ7Z5W3 292 aaKnown RBP11.88□□□□□ -0.51
HMGB2-205ENST00000511316 ZNF740Q8NDX6 193 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 SLC37A2Q8TED4 501 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 C15orf40Q8WUR7 153 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 NAT6Q93015 286 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 NDC1Q9BTX1 674 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 MRI1Q9BV20 369 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 BEX2Q9BXY8 128 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 ABCG5Q9H222 651 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 LYARQ9NX58 379 aaKnown RBP11.88□□□□□ -0.51
HMGB2-205ENST00000511316 TAC3Q9UHF0 121 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 MAP1BP46821 2468 aaKnown RBP11.88□□□□□ -0.51
HMGB2-205ENST00000511316 DSPP15924 2871 aaKnown RBP11.88□□□□□ -0.51
HMGB2-205ENST00000511316 CTDSPLO15194 276 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 LRRTM2O43300 516 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 KLF4O43474 513 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 CHP2O43745 196 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 F3P13726 295 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 CD1CP29017 333 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 AHRP35869 848 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 PER3P56645 1201 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 UBE2IP63279 158 aaKnown RBP11.88□□□□□ -0.51
HMGB2-205ENST00000511316 BAMBIQ13145 260 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 SQSTM1Q13501 440 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 DYRK1AQ13627 763 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 P2RY14Q15391 338 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 ZNF574Q6ZN55 896 aaPredicted RBP11.88□□□□□ -0.51
HMGB2-205ENST00000511316 PLEKHM3Q6ZWE6 761 aa11.88□□□□□ -0.51
HMGB2-205ENST00000511316 SZRD1Q7Z422 152 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms