RNA–Protein interactions for RNA: ENST00000511067.2

CHD1-206, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-206ENST00000511067 CCDC166P0CW27 439 aa4.07□□□□□ -1.76
CHD1-206ENST00000511067 FGF9P31371 208 aaPredicted RBP4.07□□□□□ -1.76
CHD1-206ENST00000511067 LEPP41159 167 aa4.07□□□□□ -1.76
CHD1-206ENST00000511067 CASP4P49662 377 aa4.07□□□□□ -1.76
CHD1-206ENST00000511067 CEBPDP49716 269 aaPredicted RBP4.07□□□□□ -1.76
CHD1-206ENST00000511067 DAP3P51398 398 aaKnown RBP4.07□□□□□ -1.76
CHD1-206ENST00000511067 KRTAP10-12P60413 245 aa4.07□□□□□ -1.76
CHD1-206ENST00000511067 FGL1Q08830 312 aa4.07□□□□□ -1.76
CHD1-206ENST00000511067 ELAVL3Q14576 367 aaKnown RBP4.07□□□□□ -1.76
CHD1-206ENST00000511067 ISXQ2M1V0 245 aa4.07□□□□□ -1.76
CHD1-206ENST00000511067 CEP55Q53EZ4 464 aa4.07□□□□□ -1.76
CHD1-206ENST00000511067 PMF1Q6P1K2 205 aa4.07□□□□□ -1.76
CHD1-206ENST00000511067 WDR74Q6RFH5 385 aaPredicted RBP4.07□□□□□ -1.76
CHD1-206ENST00000511067 TRPM8Q7Z2W7 1104 aa4.07□□□□□ -1.76
CHD1-206ENST00000511067 LRRC75A-AS1Q8N1F1 130 aa4.07□□□□□ -1.76
CHD1-206ENST00000511067 EIF1ADQ8N9N8 165 aaKnown RBP4.07□□□□□ -1.76
CHD1-206ENST00000511067 TRPV1Q8NER1 839 aa4.07□□□□□ -1.76
CHD1-206ENST00000511067 OR9A1PQ8NGU1 263 aa4.07□□□□□ -1.76
CHD1-206ENST00000511067 EFHD2Q96C19 240 aaPredicted RBP4.07□□□□□ -1.76
CHD1-206ENST00000511067 MS4A14Q96JA4 679 aa4.07□□□□□ -1.76
CHD1-206ENST00000511067 SMIM14Q96QK8 99 aa4.07□□□□□ -1.76
CHD1-206ENST00000511067 ZNF184Q99676 751 aaPredicted RBP4.07□□□□□ -1.76
CHD1-206ENST00000511067 PARD6BQ9BYG5 372 aa4.07□□□□□ -1.76
CHD1-206ENST00000511067 LCMT1Q9UIC8 334 aa4.07□□□□□ -1.76
CHD1-206ENST00000511067 TP53TG3Q9ULZ0 132 aa4.07□□□□□ -1.76
CHD1-206ENST00000511067 EPOPA6NHQ4 379 aa4.06□□□□□ -1.76
CHD1-206ENST00000511067 TRDCB7Z8K6 153 aa4.06□□□□□ -1.76
CHD1-206ENST00000511067 OR10H3O60404 316 aa4.06□□□□□ -1.76
CHD1-206ENST00000511067 SLITRK3O94933 977 aa4.06□□□□□ -1.76
CHD1-206ENST00000511067 LGALS2P05162 132 aa4.06□□□□□ -1.76
CHD1-206ENST00000511067 ALOX5P09917 674 aa4.06□□□□□ -1.76
CHD1-206ENST00000511067 POU2F1P14859 743 aa4.06□□□□□ -1.76
CHD1-206ENST00000511067 HOXD10P28358 340 aa4.06□□□□□ -1.76
CHD1-206ENST00000511067 MAP3K8P41279 467 aa4.06□□□□□ -1.76
CHD1-206ENST00000511067 CCT3P49368 545 aaKnown RBP4.06□□□□□ -1.76
CHD1-206ENST00000511067 HSPA2P54652 639 aa4.06□□□□□ -1.76
CHD1-206ENST00000511067 RIPK1Q13546 671 aa4.06□□□□□ -1.76
CHD1-206ENST00000511067 SLC15A2Q16348 729 aa4.06□□□□□ -1.76
CHD1-206ENST00000511067 DPYSL2Q16555 572 aa4.06□□□□□ -1.76
CHD1-206ENST00000511067 TRIM16LQ309B1 348 aa4.06□□□□□ -1.76
CHD1-206ENST00000511067 SFT2D3Q587I9 215 aa4.06□□□□□ -1.76
CHD1-206ENST00000511067 TPGS2Q68CL5 300 aa4.06□□□□□ -1.76
CHD1-206ENST00000511067 FBXO16Q8IX29 292 aaPredicted RBP4.06□□□□□ -1.76
CHD1-206ENST00000511067 NRMQ8IXM6 262 aa4.06□□□□□ -1.76
CHD1-206ENST00000511067 PAQR8Q8TEZ7 354 aa4.06□□□□□ -1.76
CHD1-206ENST00000511067 CCNL2Q96S94 520 aaPredicted RBP4.06□□□□□ -1.76
CHD1-206ENST00000511067 SECISBP2Q96T21 854 aaKnown RBP4.06□□□□□ -1.76
CHD1-206ENST00000511067 SLC39A3Q9BRY0 314 aa4.06□□□□□ -1.76
CHD1-206ENST00000511067 CNPY3Q9BT09 278 aa4.06□□□□□ -1.76
CHD1-206ENST00000511067 ISG20L2Q9H9L3 353 aaKnown RBP4.06□□□□□ -1.76
CHD1-206ENST00000511067 PRR34Q9NV39 138 aa4.06□□□□□ -1.76
CHD1-206ENST00000511067 PTBP2Q9UKA9 531 aaKnown RBP4.06□□□□□ -1.76
CHD1-206ENST00000511067 CDH9Q9ULB4 789 aa4.06□□□□□ -1.76
CHD1-206ENST00000511067 TIMM10BQ9Y5J6 103 aa4.06□□□□□ -1.76
CHD1-206ENST00000511067 ZNF208O43345 1280 aa4.05□□□□□ -1.76
CHD1-206ENST00000511067 PRKAB2O43741 272 aa4.05□□□□□ -1.76
CHD1-206ENST00000511067 IGKV3-15P01624 115 aa4.05□□□□□ -1.76
CHD1-206ENST00000511067 IGHDP01880 384 aa4.05□□□□□ -1.76
CHD1-206ENST00000511067 PSMB1P20618 241 aaKnown RBP4.05□□□□□ -1.76
CHD1-206ENST00000511067 COX5AP20674 150 aa4.05□□□□□ -1.76
CHD1-206ENST00000511067 RPL13AP40429 203 aaKnown RBP4.05□□□□□ -1.76
CHD1-206ENST00000511067 EGFEM1PQ0D2K5 195 aa4.05□□□□□ -1.76
CHD1-206ENST00000511067 ZSCAN25Q6NSZ9 544 aa4.05□□□□□ -1.76
CHD1-206ENST00000511067 LCA5Q86VQ0 697 aa4.05□□□□□ -1.76
CHD1-206ENST00000511067 SLC35F2Q8IXU6 374 aa4.05□□□□□ -1.76
CHD1-206ENST00000511067 OR5D13Q8NGL4 314 aa4.05□□□□□ -1.76
CHD1-206ENST00000511067 HTR3CQ8WXA8 447 aa4.05□□□□□ -1.76
CHD1-206ENST00000511067 SHC3Q92529 594 aa4.05□□□□□ -1.76
CHD1-206ENST00000511067 NEIL2Q969S2 332 aa4.05□□□□□ -1.76
CHD1-206ENST00000511067 ZBTB18Q99592 522 aa4.05□□□□□ -1.76
CHD1-206ENST00000511067 NPAS2Q99743 824 aa4.05□□□□□ -1.76
CHD1-206ENST00000511067 CAPS2Q9BXY5 557 aa4.05□□□□□ -1.76
CHD1-206ENST00000511067 RAB34Q9BZG1 259 aa4.05□□□□□ -1.76
CHD1-206ENST00000511067 CLEC4AQ9UMR7 237 aa4.05□□□□□ -1.76
CHD1-206ENST00000511067 MEMO1Q9Y316 297 aa4.05□□□□□ -1.76
CHD1-206ENST00000511067 IKBKGQ9Y6K9 419 aa4.05□□□□□ -1.76
CHD1-206ENST00000511067 KANK1Q14678 1352 aa4.04□□□□□ -1.76
CHD1-206ENST00000511067 ZNF318Q5VUA4 2279 aa4.04□□□□□ -1.76
CHD1-206ENST00000511067 KIF2AO00139 706 aaPredicted RBP4.04□□□□□ -1.76
CHD1-206ENST00000511067 MPHOSPH10O00566 681 aaKnown RBP4.04□□□□□ -1.76
CHD1-206ENST00000511067 SURF6O75683 361 aaKnown RBP4.04□□□□□ -1.76
CHD1-206ENST00000511067 AP2A1O95782 977 aa4.04□□□□□ -1.76
CHD1-206ENST00000511067 HSPB1P04792 205 aaKnown RBP4.04□□□□□ -1.76
CHD1-206ENST00000511067 OR8U8P0C7N1 319 aa4.04□□□□□ -1.76
CHD1-206ENST00000511067 CRYBB1P53674 252 aaPredicted RBP4.04□□□□□ -1.76
CHD1-206ENST00000511067 AIF1P55008 147 aa4.04□□□□□ -1.76
CHD1-206ENST00000511067 CCDC173Q0VFZ6 552 aa4.04□□□□□ -1.76
CHD1-206ENST00000511067 ARL6IP1Q15041 203 aa4.04□□□□□ -1.76
CHD1-206ENST00000511067 EOGTQ5NDL2 527 aa4.04□□□□□ -1.76
CHD1-206ENST00000511067 C1orf220Q5T0J3 134 aa4.04□□□□□ -1.76
CHD1-206ENST00000511067 OR4F3Q6IEY1 312 aa4.04□□□□□ -1.76
CHD1-206ENST00000511067 GDPD3Q7L5L3 318 aa4.04□□□□□ -1.76
CHD1-206ENST00000511067 ARCQ7LC44 396 aa4.04□□□□□ -1.76
CHD1-206ENST00000511067 EFL1Q7Z2Z2 1120 aaKnown RBP4.04□□□□□ -1.76
CHD1-206ENST00000511067 OR2L13Q8N349 312 aa4.04□□□□□ -1.76
CHD1-206ENST00000511067 ATP6V0D2Q8N8Y2 350 aa4.04□□□□□ -1.76
CHD1-206ENST00000511067 BHLHE23Q8NDY6 225 aa4.04□□□□□ -1.76
CHD1-206ENST00000511067 CATSPER1Q8NEC5 780 aa4.04□□□□□ -1.76
CHD1-206ENST00000511067 MAIP1Q8WWC4 291 aa4.04□□□□□ -1.76
CHD1-206ENST00000511067 RPRD1AQ96P16 312 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms